Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 MIR888-201ENST00000401186 77 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 NCOR1P3-201ENST00000420479 303 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 BOLA3P3-201ENST00000505182 232 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 AL590705.4-201ENST00000532209 134 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 AC124947.2-202ENST00000552735 133 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 MIR3937-201ENST00000580135 106 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 AL022067.1-201ENST00000602426 454 ntBASIC0.35□□□□□ -2.35
CCDC18Q5T9S5 AC092125.1-201ENST00000562568 1995 ntBASIC0.34□□□□□ -2.35
CCDC18Q5T9S5 RNU6-414P-201ENST00000363705 104 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 Y_RNA.167-201ENST00000363735 109 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 RNU6-884P-201ENST00000363889 107 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 Z95118.1-201ENST00000421372 247 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 RPL21P47-201ENST00000483696 477 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 SMURF2P1-201ENST00000514992 481 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 ELOCP5-201ENST00000604924 333 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 AC013470.4-201ENST00000619978 986 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 MIR338-201ENST00000636369 67 ntBASIC0.34□□□□□ -2.36
CCDC18Q5T9S5 Y_RNA.549-201ENST00000384657 102 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 RPL21P24-201ENST00000413752 448 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 AC245102.2-201ENST00000448956 180 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 RNU6-27P-201ENST00000516146 107 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 C1DP5-201ENST00000525775 383 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 AC023158.1-201ENST00000561632 1025 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 AL713866.2-201ENST00000603579 219 ntBASIC0.33□□□□□ -2.36
CCDC18Q5T9S5 GDI2P1-201ENST00000429312 1336 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 RPS26P5-201ENST00000418544 335 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AL606489.2-201ENST00000433886 234 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 RPS25P9-201ENST00000435591 252 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 Z82210.1-201ENST00000440037 231 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AL163195.1-201ENST00000496941 348 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AC121161.1-201ENST00000510606 652 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 SNORA31.17-201ENST00000516953 127 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 COPS8P3-201ENST00000526024 482 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AC009268.1-201ENST00000561352 1203 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 ADAM3B-201ENST00000569937 840 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 AP005229.2-201ENST00000609980 697 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC18Q5T9S5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 SNORA2A-201ENST00000383885 135 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 RPL26P6-201ENST00000440913 438 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 AC005261.5-201ENST00000596280 355 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 BNIP3P23-201ENST00000599655 511 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 BBIP1P1-201ENST00000602999 279 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 AC021851.1-201ENST00000608537 1082 ntBASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
CCDC18Q5T9S5 RNU5A-1-201ENST00000362698 116 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 SNORD18A-201ENST00000363753 72 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 Z99497.1-201ENST00000421282 135 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 EIF1P1-201ENST00000421436 341 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 RNU6-1256P-201ENST00000516539 103 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 AC009033.1-201ENST00000624279 431 ntBASIC0.3□□□□□ -2.36
CCDC18Q5T9S5 RNU6-140P-201ENST00000384566 108 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC114482.1-201ENST00000418010 247 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC092634.6-201ENST00000418558 192 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC098831.1-201ENST00000440661 216 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC132479.1-201ENST00000449160 144 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 COX6CP6-201ENST00000490840 228 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC005741.1-201ENST00000511094 432 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 CYCSP27-201ENST00000527643 293 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC069304.2-201ENST00000605154 435 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AL138713.1-201ENST00000624026 2130 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 Z75746.1-201ENST00000440243 2080 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 RNU1-58P-201ENST00000362413 163 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AL591034.2-201ENST00000402839 359 ntBASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC18Q5T9S5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
CCDC18Q5T9S5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 RNU6-45P-201ENST00000384471 107 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 SNORA48.1-201ENST00000390879 135 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 AC078974.1-201ENST00000411597 223 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 SCARNA15.2-201ENST00000516409 127 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 SNORD19.2-201ENST00000516978 73 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 BNIP3P27-201ENST00000599991 412 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms