Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR196A2-201ENST00000385189 110 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL356421.1-201ENST00000403255 413 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 USP9YP26-201ENST00000421008 661 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 MTND1P16-201ENST00000465177 898 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RN7SKP164-201ENST00000516138 266 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNY4P37-201ENST00000516225 96 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 OR6C73P-201ENST00000546432 358 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNF2P1-201ENST00000442955 1010 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU1-61P-201ENST00000516107 151 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC079791.1-201ENST00000605356 973 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL078595.3-201ENST00000623815 1166 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.145-201ENST00000363527 102 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.150-201ENST00000363562 102 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RPS3AP24-201ENST00000407896 734 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 RNU6-193P-201ENST00000410977 107 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 EIF4EP4-201ENST00000424916 578 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC241584.1-201ENST00000438469 1241 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC007969.2-201ENST00000441891 191 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 MTATP6P9-201ENST00000515039 680 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL136520.1-202ENST00000555494 763 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 MIR5571-201ENST00000577998 113 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 COX6CP3-201ENST00000580869 223 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC025165.5-201ENST00000602802 578 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AC090517.2-201ENST00000614966 680 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 AL079343.1-201ENST00000572358 1771 ntBASIC0.01□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.13-201ENST00000362403 112 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AL117342.1-201ENST00000404861 406 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC092634.2-201ENST00000428146 1010 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC092393.1-201ENST00000439625 742 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 RPL21P47-201ENST00000483696 477 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 TRBVA-201ENST00000498804 316 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AL359212.1-201ENST00000556608 614 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AP000676.3-201ENST00000623299 569 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.6-201ENST00000362350 114 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0□□□□□ -2.41
UBR4Q5T4S7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AC010683.1-201ENST00000473673 378 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AL132822.1-201ENST00000617063 513 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 uc_338.17-201ENST00000619633 179 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AP003400.5-201ENST00000624827 617 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0□□□□□ -2.41
UBR4Q5T4S7 MTND4P14-201ENST00000435799 1354 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 Y_RNA.432-201ENST00000384087 111 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 MIR518A1-201ENST00000385068 85 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0□□□□□ -2.41
UBR4Q5T4S7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0□□□□□ -2.41
UBR4Q5T4S7 AL163195.1-201ENST00000496941 348 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC114981.1-201ENST00000503897 678 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 MTCYBP16-201ENST00000509187 1129 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0□□□□□ -2.41
UBR4Q5T4S7 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 MIR3616-201ENST00000584070 92 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AL357312.1-201ENST00000603879 298 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC007038.2-201ENST00000608095 740 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 AC015726.3-201ENST00000624501 418 ntBASIC0□□□□□ -2.41
UBR4Q5T4S7 RNU1-124P-201ENST00000363861 145 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 TRGVB-201ENST00000453257 471 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 RNU7-193P-201ENST00000516723 65 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC-0□□□□□ -2.41
UBR4Q5T4S7 AP002004.2-201ENST00000531656 154 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 AL450336.1-201ENST00000605180 586 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 MIR3167-201ENST00000579623 85 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 AC019226.1-201ENST00000625666 515 ntBASIC-0□□□□□ -2.41
UBR4Q5T4S7 RPL21P32-201ENST00000419877 477 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 CASP3P1-201ENST00000446037 609 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 HMGN2P21-201ENST00000447764 270 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC023632.1-201ENST00000518463 375 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC144521.1-201ENST00000607148 956 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 SNORD33-201ENST00000362761 85 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC092809.3-201ENST00000415453 231 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC087272.1-201ENST00000523624 533 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 MIR608-201ENST00000384820 100 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 MIR106A-201ENST00000384870 81 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 ZNF863P-201ENST00000426746 417 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 RPL17P35-201ENST00000432217 549 ntBASIC-0.01□□□□□ -2.41
UBR4Q5T4S7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms