Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 RNU1-70P-201ENST00000362618 164 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 SNORA38.1-201ENST00000364172 131 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AP002088.1-201ENST00000382740 395 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 MIR517A-201ENST00000385001 87 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 SNORA48.8-201ENST00000391324 134 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AP000567.1-201ENST00000406413 156 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 RNU2-71P-201ENST00000411395 189 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 UBE2V1P4-201ENST00000425374 344 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 TOMM20P4-201ENST00000427861 435 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 snoU13.22-201ENST00000459428 104 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 RPL31P13-201ENST00000484151 370 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC097473.1-201ENST00000508142 408 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.661-201ENST00000516003 99 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1045P-201ENST00000516321 107 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC100830.2-201ENST00000581636 240 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 CYP2C61P-201ENST00000604072 290 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC004805.2-201ENST00000605382 482 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 uc_338.22-201ENST00000622722 187 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC073476.4-201ENST00000628409 72 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 AC007785.2-201ENST00000598627 1916 ntBASIC3.82□□□□□ -1.8
CCDC178Q5BJE1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 MIR208A-201ENST00000362287 71 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-37P-201ENST00000362692 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-11P-201ENST00000364234 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-7-201ENST00000364784 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-8-201ENST00000365467 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-25P-201ENST00000383873 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 SNORA22B-201ENST00000383876 138 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1-201ENST00000383898 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-48P-201ENST00000384161 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-36P-201ENST00000384172 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-4P-201ENST00000384205 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-5P-201ENST00000384238 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-3P-201ENST00000384314 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-16P-201ENST00000384385 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-790P-201ENST00000384479 105 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-15P-201ENST00000384534 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-2-201ENST00000384627 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-29P-201ENST00000384637 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-9-201ENST00000384776 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-33P-201ENST00000384793 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AL357075.1-201ENST00000404107 726 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNA5SP229-201ENST00000410809 99 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AC093151.1-201ENST00000427711 313 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 SMURF2P1-201ENST00000514992 481 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 TRAV28-201ENST00000557548 323 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 YPEL5P2-201ENST00000605553 359 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 RNU6-6P-201ENST00000606623 107 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 AC011890.2-201ENST00000613393 294 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 MIR7112-201ENST00000616126 65 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 MIR7153-201ENST00000637758 57 ntBASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC178Q5BJE1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 MIR412-201ENST00000362142 91 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 SNORA33.2-201ENST00000365413 134 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 RNU6-331P-201ENST00000384724 107 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 MIR10A-201ENST00000385043 110 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 RNU2-68P-201ENST00000410878 191 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AL592148.1-201ENST00000413568 445 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 Z75741.1-201ENST00000446793 314 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AC011005.2-201ENST00000487324 359 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 RNU6-572P-201ENST00000516724 80 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 SNORA31.19-201ENST00000517079 126 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AC011602.1-201ENST00000546484 331 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 MIR5195-201ENST00000583555 115 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AL121917.1-203ENST00000605534 577 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 AL162730.1-201ENST00000605734 292 ntBASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CCDC178Q5BJE1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC007256.1-201ENST00000392253 2765 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 RNU1-75P-201ENST00000347264 129 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 RNU6-384P-201ENST00000364900 104 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 SNORA70.4-201ENST00000365509 134 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms