Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFX4Q33E94 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFX4Q33E94 RNY1P12-201ENST00000364251 105 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 RNU1-91P-201ENST00000364746 163 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 RNU6-282P-201ENST00000365357 103 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFX4Q33E94 AL133475.1-201ENST00000404414 305 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 FTH1P15-201ENST00000406984 280 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 EIF4EP4-201ENST00000424916 578 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC000111.3-201ENST00000433478 193 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AL360271.2-201ENST00000447710 161 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AL136380.1-201ENST00000447970 162 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 PSPHP1-201ENST00000450062 261 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC003071.1-201ENST00000451219 789 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC116562.3-201ENST00000506136 177 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 MTCO3P28-201ENST00000513351 515 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.89□□□□□ -2.11
RFX4Q33E94 RNU6-685P-201ENST00000517088 95 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC068587.5-201ENST00000528506 175 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC137800.2-201ENST00000574375 120 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AC008088.1-201ENST00000580993 280 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 MIR3682-201ENST00000581338 84 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 AL021997.1-201ENST00000605757 193 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AL359740.1-201ENST00000624340 592 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 MIR7157-201ENST00000635801 60 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 IGHVIII-44-202ENST00000636235 289 ntBASIC1.89□□□□□ -2.11
RFX4Q33E94 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
RFX4Q33E94 AC131280.1-202ENST00000624067 4211 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX4Q33E94 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 SNORD14B-201ENST00000364533 90 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 RNA5SP125-201ENST00000364843 120 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 RNU6-1280P-201ENST00000365211 107 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 RNU6-74P-201ENST00000384235 107 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 Y_RNA.576-201ENST00000384781 102 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 MIR147B-201ENST00000390185 80 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RFX4Q33E94 Y_RNA.623-201ENST00000411128 95 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AL030996.1-201ENST00000411430 235 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 BX295541.1-201ENST00000417774 250 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AL365338.1-201ENST00000422282 858 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 MTATP6P17-201ENST00000431030 672 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 FABP5P14-201ENST00000437273 393 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 USP9YP8-201ENST00000441913 500 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 MTND2P4-201ENST00000445034 1004 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 USP9YP29-201ENST00000445112 563 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC079448.1-201ENST00000449377 373 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 BTF3P15-201ENST00000455606 336 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
RFX4Q33E94 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX4Q33E94 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 AC091965.2-201ENST00000512324 613 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX4Q33E94 SNORA25.11-201ENST00000515935 105 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 SCARNA3-201ENST00000517097 143 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 FAM92A1P1-201ENST00000528023 890 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC092325.1-201ENST00000566449 554 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX4Q33E94 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX4Q33E94 MIR4765-201ENST00000585007 77 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 Z99497.2-201ENST00000603634 310 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 MIR98-201ENST00000606724 119 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 uc_338.14-201ENST00000613162 166 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC010678.1-201ENST00000614118 713 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC078883.4-201ENST00000623218 367 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 AC097520.1-201ENST00000624435 385 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
RFX4Q33E94 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.87□□□□□ -2.11
RFX4Q33E94 RNU6-179P-201ENST00000363350 107 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 Y_RNA.201-201ENST00000364052 96 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 RNU6-371P-201ENST00000364283 108 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 SNORD115-7-201ENST00000365306 82 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 RNU6-748P-201ENST00000384648 107 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 SNORA11.4-201ENST00000408823 129 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX4Q33E94 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.87□□□□□ -2.11
RFX4Q33E94 MTCYBP5-201ENST00000423752 1135 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms