Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC114491.1-201ENST00000416095 246 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL139415.2-201ENST00000431968 163 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 NEFMP1-201ENST00000443423 1006 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 GMFBP1-201ENST00000467831 427 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 GZMAP1-201ENST00000503054 631 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC105417.1-201ENST00000514691 285 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC174048.1-201ENST00000603389 144 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AL365204.3-201ENST00000612448 685 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 FER-210ENST00000628534 558 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 MIR7157-201ENST00000635801 60 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 MTND5P30-201ENST00000452896 1731 ntBASIC3.1□□□□□ -1.91
CCDC96Q2M329 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC96Q2M329 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 Y_RNA.381-201ENST00000365666 102 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-701P-201ENST00000384059 107 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-817P-201ENST00000391083 104 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 USP9YP6-201ENST00000413550 854 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 USP9YP27-201ENST00000418455 438 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 MTND4P25-201ENST00000441039 533 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 HMGN2P10-201ENST00000448085 265 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC073415.1-201ENST00000449240 153 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC233279.1-201ENST00000455300 423 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RPS27AP9-201ENST00000477681 438 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-1281P-201ENST00000516223 105 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNA5SP82-201ENST00000516707 92 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-826P-201ENST00000516827 104 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 RNU6-685P-201ENST00000517088 95 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AL162413.1-201ENST00000603198 110 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 BNIP3P9-201ENST00000603714 553 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 AC002553.4-201ENST00000616896 331 ntBASIC3.09□□□□□ -1.91
CCDC96Q2M329 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC96Q2M329 CKAP2P1-201ENST00000555477 2049 ntBASIC3.09□□□□□ -1.92
CCDC96Q2M329 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC004944.1-201ENST00000517807 3059 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RNU6-451P-201ENST00000362921 107 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RNY3P3-201ENST00000363816 102 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 SNORD115-7-201ENST00000365306 82 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 SNORA69-201ENST00000383895 132 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RNU6-641P-201ENST00000384006 107 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 Y_RNA.453-201ENST00000384223 109 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 SNORA11.2-201ENST00000408318 127 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 SNRPEP10-201ENST00000420249 274 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 SRIP1-201ENST00000489235 288 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC114781.4-201ENST00000513707 639 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RNA5SP282-201ENST00000516355 108 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RN7SKP219-201ENST00000516825 296 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 RNU6-703P-201ENST00000516946 107 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC134698.4-201ENST00000523451 826 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AL133241.1-201ENST00000556832 487 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC023824.2-201ENST00000566185 400 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC234778.2-201ENST00000566241 354 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC011155.2-201ENST00000623202 216 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC025034.2-201ENST00000623264 286 ntBASIC3.08□□□□□ -1.92
CCDC96Q2M329 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC96Q2M329 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC96Q2M329 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC96Q2M329 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
CCDC96Q2M329 AC080100.1-201ENST00000624239 5356 ntBASIC3.07□□□□□ -1.92
CCDC96Q2M329 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC96Q2M329 NACAP2-201ENST00000318548 624 ntBASIC3.07□□□□□ -1.92
CCDC96Q2M329 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC96Q2M329 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
CCDC96Q2M329 Y_RNA.38-201ENST00000362617 102 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms