| NDUFA9 | Q16795 | RANP3-201 | ENST00000530970 | 276 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC105245.1-201 | ENST00000581934 | 244 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC002115.1-201 | ENST00000589603 | 568 nt | TSL 4 BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | Z99497.2-201 | ENST00000603634 | 310 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC073114.1-201 | ENST00000612027 | 490 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AC024581.2-201 | ENST00000619986 | 252 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | AL359740.1-201 | ENST00000624340 | 592 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | Z75746.1-201 | ENST00000440243 | 2080 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| NDUFA9 | Q16795 | SNX16-212 | ENST00000615066 | 1918 nt | TSL 5 BASIC | 2.09 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RGS13-204 | ENST00000543215 | 1518 nt | APPRIS P1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | DEFB107A-201 | ENST00000335021 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | DEFB107B-201 | ENST00000355602 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MDM2-207 | ENST00000360430 | 891 nt | TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-858P-201 | ENST00000362436 | 107 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-371P-201 | ENST00000364283 | 108 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | Y_RNA.367-201 | ENST00000365544 | 101 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | OR5H15-201 | ENST00000383696 | 930 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SNORA11.2-201 | ENST00000408318 | 127 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RN7SKP142-201 | ENST00000411236 | 328 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-387P-201 | ENST00000411331 | 105 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | LINC01312-201 | ENST00000412745 | 775 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | EEF1A1P40-201 | ENST00000412883 | 573 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC064852.1-201 | ENST00000427571 | 851 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC018693.1-201 | ENST00000442829 | 550 nt | TSL 4 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC079781.2-201 | ENST00000446424 | 169 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL360271.2-201 | ENST00000447710 | 161 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC010974.1-201 | ENST00000450509 | 374 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC117462.1-201 | ENST00000461186 | 554 nt | TSL 4 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | DYNLL1P5-201 | ENST00000467158 | 270 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | OR5AQ1P-201 | ENST00000527596 | 927 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | OR5AL2P-201 | ENST00000532185 | 920 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | ZNF84-205 | ENST00000535439 | 647 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL512791.1-201 | ENST00000555853 | 300 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL590229.1-201 | ENST00000603497 | 542 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC245014.2-201 | ENST00000603689 | 287 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL138889.2-201 | ENST00000603883 | 242 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC246785.4-201 | ENST00000605374 | 287 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC091965.1-202 | ENST00000607662 | 397 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC005332.10-201 | ENST00000612725 | 619 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL596220.1-201 | ENST00000622121 | 542 nt | TSL 4 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC244517.12-201 | ENST00000623581 | 663 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC092656.1-203 | ENST00000624134 | 423 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC068631.1-221 | ENST00000626006 | 592 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | HSPA8P4-201 | ENST00000511877 | 1920 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | ZNF451-208 | ENST00000491832 | 3632 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MTND5P6-201 | ENST00000422338 | 1798 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SCN7A-206 | ENST00000619410 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SCN7A-207 | ENST00000621965 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MTND5P17-201 | ENST00000418405 | 1603 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SNORD14B-201 | ENST00000364533 | 90 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SNORD115-7-201 | ENST00000365306 | 82 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-72P-201 | ENST00000384285 | 79 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MIR10A-201 | ENST00000385043 | 110 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MRLN-201 | ENST00000414264 | 422 nt | APPRIS P2 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC010731.2-201 | ENST00000415275 | 440 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RPL21P90-201 | ENST00000415692 | 466 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | CYCSP48-201 | ENST00000417124 | 323 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | C1DP2-201 | ENST00000418167 | 426 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL445989.1-202 | ENST00000418943 | 776 nt | TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC133106.1-201 | ENST00000419029 | 397 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MTCYBP5-201 | ENST00000423752 | 1135 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | LINC00844-201 | ENST00000432535 | 477 nt | TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MTCO3P5-201 | ENST00000433620 | 714 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | NFIA-AS1-201 | ENST00000442027 | 384 nt | TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC244505.5-201 | ENST00000443639 | 207 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL157882.1-201 | ENST00000447148 | 429 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC098826.2-201 | ENST00000452011 | 651 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC104806.1-201 | ENST00000508720 | 308 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AF117829.1-203 | ENST00000520306 | 421 nt | TSL 5 BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AP003072.2-201 | ENST00000527756 | 676 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | LRRC37A5P-203 | ENST00000580181 | 585 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | PCDH11Y-203 | ENST00000362095 | 4220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC138393.1-203 | ENST00000327086 | 343 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-108P-201 | ENST00000365558 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RNU6-74P-201 | ENST00000384235 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MDM2-208 | ENST00000393410 | 732 nt | TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MDM2-210 | ENST00000393413 | 657 nt | TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | RPS3AP44-201 | ENST00000425466 | 790 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | MTATP6P17-201 | ENST00000431030 | 672 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AC000111.3-201 | ENST00000433478 | 193 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | AL031667.1-201 | ENST00000440222 | 725 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| NDUFA9 | Q16795 | LINC02195-201 | ENST00000443373 | 294 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |