Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC074117.2-201ENST00000417130 397 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RPL22P18-201ENST00000417197 377 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AL354692.1-201ENST00000423044 315 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX1Q16384 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.42□□□□□ -2.18
SSX1Q16384 RPL23AP6-201ENST00000446637 472 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 MTND1P12-201ENST00000455231 147 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 snoU109.2-201ENST00000459316 135 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.42□□□□□ -2.18
SSX1Q16384 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.42□□□□□ -2.18
SSX1Q16384 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX1Q16384 MTCYBP33-201ENST00000575007 1130 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 MIR4999-201ENST00000585029 91 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 CLIC4P2-201ENST00000601934 717 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AL078605.1-201ENST00000603529 500 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AL031281.1-201ENST00000604049 488 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AC126118.1-201ENST00000607744 628 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX1Q16384 AC087241.4-201ENST00000612441 480 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX1Q16384 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
SSX1Q16384 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.41□□□□□ -2.18
SSX1Q16384 MIR449A-201ENST00000362113 91 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 MIR412-201ENST00000362142 91 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 RNU6-529P-201ENST00000363383 104 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 RNU6-622P-201ENST00000384272 103 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 Y_RNA.500-201ENST00000384466 111 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 MIR1283-2-201ENST00000408621 87 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX1Q16384 UBE2V1P10-201ENST00000414685 269 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC106883.1-201ENST00000418805 562 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 RPS15AP12-201ENST00000419498 388 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC244636.1-201ENST00000421152 228 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 RPS27AP14-201ENST00000422868 454 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.41□□□□□ -2.18
SSX1Q16384 AL627311.1-201ENST00000431514 115 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.41□□□□□ -2.18
SSX1Q16384 MTCO3P5-201ENST00000433620 714 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 RPL22P17-201ENST00000438729 315 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC118469.1-201ENST00000442943 488 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 NDUFB1P2-201ENST00000449477 176 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.41□□□□□ -2.18
SSX1Q16384 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AP001025.1-201ENST00000486139 332 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 HMGB1P30-201ENST00000492455 606 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SSX1Q16384 MTATP6P9-201ENST00000515039 680 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.41□□□□□ -2.18
SSX1Q16384 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.41□□□□□ -2.18
SSX1Q16384 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX1Q16384 ZNF519P3-201ENST00000557158 1032 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC090888.2-201ENST00000559765 1144 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX1Q16384 AP002360.4-201ENST00000606980 481 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX1Q16384 AC022306.3-201ENST00000619930 550 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SSX1Q16384 HAUS6P2-201ENST00000433254 2404 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 ZNF876P-202ENST00000398732 1485 ntBASIC1.41□□□□□ -2.18
SSX1Q16384 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
SSX1Q16384 U8.3-201ENST00000363321 132 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 RNU6-1274P-201ENST00000384557 107 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 SNORA8-201ENST00000384574 139 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 MIR583-201ENST00000384846 75 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 BX510359.4-201ENST00000423750 193 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX1Q16384 CR769776.1-201ENST00000441254 787 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 AC012308.1-201ENST00000451232 178 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.4□□□□□ -2.19
SSX1Q16384 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.4□□□□□ -2.19
SSX1Q16384 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SSX1Q16384 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.4□□□□□ -2.19
SSX1Q16384 AC112206.3-201ENST00000514578 389 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 RNU7-51P-201ENST00000516560 62 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.4□□□□□ -2.19
SSX1Q16384 AP004607.1-201ENST00000524456 203 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX1Q16384 AP000763.2-201ENST00000540641 163 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX1Q16384 AC018714.1-201ENST00000605028 208 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 AC005014.3-201ENST00000605985 190 ntBASIC1.4□□□□□ -2.19
SSX1Q16384 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.4□□□□□ -2.19
SSX1Q16384 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.4□□□□□ -2.19
SSX1Q16384 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.39□□□□□ -2.19
SSX1Q16384 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SSX1Q16384 U8.2-201ENST00000363156 134 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SSX1Q16384 SNORA70B-201ENST00000384210 135 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 MIR513B-201ENST00000385136 84 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 SNORD115.1-201ENST00000391109 76 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 RNU2-32P-201ENST00000411193 191 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 SSR1P2-201ENST00000415208 787 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AL008987.1-201ENST00000415528 237 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AC007098.1-201ENST00000420122 367 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.39□□□□□ -2.19
SSX1Q16384 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms