Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGN3Q15651 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AL133475.1-201ENST00000404414 305 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 RNA5SP193-201ENST00000410353 107 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 RPL26P27-201ENST00000414397 437 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 PPP1R11P2-201ENST00000423543 382 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 UBE2V1P8-201ENST00000437166 265 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AL358794.1-201ENST00000445689 381 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AC002381.1-201ENST00000447049 280 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN3Q15651 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN3Q15651 COX7A2P2-201ENST00000505291 250 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.18□□□□□ -2.38
HMGN3Q15651 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 RNA5SP503-201ENST00000517047 117 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGN3Q15651 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.18□□□□□ -2.38
HMGN3Q15651 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN3Q15651 AC022432.1-201ENST00000595739 310 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AC105129.3-201ENST00000605455 485 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 AC080188.3-201ENST00000624842 748 ntBASIC0.18□□□□□ -2.38
HMGN3Q15651 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGN3Q15651 RNU6-1339P-201ENST00000363574 91 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.17□□□□□ -2.38
HMGN3Q15651 SNX2P2-201ENST00000424553 323 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 PSMA6P3-201ENST00000428242 164 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 MTCO1P18-201ENST00000455518 1419 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.17□□□□□ -2.38
HMGN3Q15651 AC084024.2-201ENST00000503480 791 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 RNA5SP168-201ENST00000516642 112 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.17□□□□□ -2.38
HMGN3Q15651 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN3Q15651 MTCO2P15-201ENST00000532655 656 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN3Q15651 AC091489.2-201ENST00000566263 604 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 GAS5-AS1-201ENST00000602767 694 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 AL365434.2-201ENST00000607979 234 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.17□□□□□ -2.38
HMGN3Q15651 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
HMGN3Q15651 MTCO1P23-201ENST00000415223 1526 ntBASIC0.17□□□□□ -2.38
HMGN3Q15651 Y_RNA.224-201ENST00000364308 111 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 SNORA51.6-201ENST00000384151 125 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 RPL22P22-201ENST00000395439 379 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 FTH1P15-201ENST00000406984 280 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 CCDC58P2-201ENST00000417131 366 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 MTCYBP38-201ENST00000417160 1123 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AL589872.1-201ENST00000426602 288 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN3Q15651 RNU6-581P-201ENST00000516214 105 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 SNORA70.22-201ENST00000517160 124 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.16□□□□□ -2.38
HMGN3Q15651 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.16□□□□□ -2.38
HMGN3Q15651 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.16□□□□□ -2.38
HMGN3Q15651 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.16□□□□□ -2.38
HMGN3Q15651 AC002545.1-201ENST00000592511 181 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 RPL30P11-203ENST00000598995 310 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.16□□□□□ -2.38
HMGN3Q15651 AL357094.1-201ENST00000603845 844 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AC090578.1-201ENST00000604955 591 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AC112220.2-201ENST00000605513 533 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.16□□□□□ -2.38
HMGN3Q15651 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
HMGN3Q15651 AL132822.1-201ENST00000617063 513 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AL590396.2-201ENST00000636511 1041 ntBASIC0.16□□□□□ -2.38
HMGN3Q15651 AL589743.1-201ENST00000551932 2712 ntBASIC0.15□□□□□ -2.38
HMGN3Q15651 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.15□□□□□ -2.38
HMGN3Q15651 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HMGN3Q15651 RNU6-110P-201ENST00000384508 104 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 AL356776.1-201ENST00000406574 447 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 MTCO2P12-201ENST00000427426 682 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HMGN3Q15651 RPL31P54-201ENST00000429803 370 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 AC092001.1-201ENST00000453012 261 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 SNRPGP9-201ENST00000456025 225 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 AC104806.1-201ENST00000508720 308 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
HMGN3Q15651 RNU6-678P-201ENST00000516832 109 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 RNU6-1092P-201ENST00000516955 87 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 RNA5SP490-201ENST00000517141 136 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.15□□□□□ -2.39
HMGN3Q15651 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.15□□□□□ -2.39
HMGN3Q15651 AC025423.5-201ENST00000550230 219 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.15□□□□□ -2.39
HMGN3Q15651 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.15□□□□□ -2.39
HMGN3Q15651 DUXAP11-201ENST00000603858 526 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 AC008993.2-201ENST00000631744 806 ntBASIC0.15□□□□□ -2.39
HMGN3Q15651 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.14□□□□□ -2.39
HMGN3Q15651 ENSAP3-201ENST00000312710 333 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 Y_RNA.124-201ENST00000363339 93 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 RNU6-296P-201ENST00000384608 107 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AC119751.3-201ENST00000399720 670 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 RNU2-7P-201ENST00000410794 178 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 RPS15AP9-201ENST00000439856 381 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.14□□□□□ -2.39
HMGN3Q15651 MTND2P4-201ENST00000445034 1004 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 RNU6-1132P-201ENST00000459214 107 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.14□□□□□ -2.39
HMGN3Q15651 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms