Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC092001.1-201ENST00000453012 261 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 MTCYBP1-201ENST00000454315 1119 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC093899.1-201ENST00000457984 376 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 RPL37P6-201ENST00000460682 294 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 MTCO2P6-201ENST00000463134 685 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 MTCO2P29-201ENST00000465212 189 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC104564.1-201ENST00000493028 407 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 FAM92A1P2-202ENST00000504766 877 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 RNU7-51P-201ENST00000516560 62 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 RNU6-572P-201ENST00000516724 80 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 AL121821.2-201ENST00000556081 394 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC012360.2-201ENST00000609349 391 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC025048.6-202ENST00000627667 438 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 AC004520.1-201ENST00000608362 1413 ntBASIC1.96□□□□□ -2.1
SMARCB1Q12824 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMARCB1Q12824 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.96□□□□□ -2.1
SMARCB1Q12824 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU6-190P-201ENST00000384154 102 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU5A-2P-201ENST00000384337 116 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU6-166P-201ENST00000384371 107 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 SNORA24.1-201ENST00000384401 135 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 MIR518D-201ENST00000385014 87 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 SNORA40C-201ENST00000391285 128 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 HMGN1P14-201ENST00000412459 517 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 ELOCP4-201ENST00000420090 333 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 MICF-203ENST00000432679 129 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC119618.1-201ENST00000434191 222 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC004383.1-201ENST00000438135 289 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU6-953P-201ENST00000459154 107 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 SCARNA24.1-201ENST00000516465 137 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU6-677P-201ENST00000516914 101 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 SNORA31.19-201ENST00000517079 126 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 RNU6-1315P-201ENST00000517187 99 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC011979.2-201ENST00000527568 352 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 MIR4255-201ENST00000579351 72 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 AL355598.1-201ENST00000604169 202 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AL121992.2-201ENST00000606262 256 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 MIR3199-2-201ENST00000636243 86 ntBASIC1.95□□□□□ -2.1
SMARCB1Q12824 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.95□□□□□ -2.1
SMARCB1Q12824 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCB1Q12824 CDC27P3-201ENST00000635418 1910 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 ADAM3A-203ENST00000461344 2157 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RNU6-169P-201ENST00000365336 107 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RNU6-898P-201ENST00000365627 104 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RNU6-1083P-201ENST00000384022 107 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RPS3AP36-201ENST00000398190 775 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RNU6-248P-201ENST00000410720 107 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC006366.1-201ENST00000422002 759 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 CALM2P2-201ENST00000428512 440 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RPS6P15-201ENST00000431996 751 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 RPL23AP30-201ENST00000432419 501 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC009961.2-201ENST00000435771 251 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 AK6P1-201ENST00000540219 478 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 MRPS36P5-201ENST00000551909 298 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC025678.1-201ENST00000567861 338 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.94□□□□□ -2.1
SMARCB1Q12824 BNIP3P8-201ENST00000597863 560 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC126118.1-201ENST00000607744 628 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC011939.3-201ENST00000613686 466 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC091931.1-201ENST00000623488 728 ntBASIC1.94□□□□□ -2.1
SMARCB1Q12824 U6.99-201ENST00000637524 83 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms