Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 NACAP3-201ENST00000552100 481 ntBASIC0.61□□□□□ -2.31
HMGXB3Q12766 MZT1P2-201ENST00000604387 248 ntBASIC0.61□□□□□ -2.31
HMGXB3Q12766 ELOCP5-201ENST00000604924 333 ntBASIC0.61□□□□□ -2.31
HMGXB3Q12766 AC011374.2-201ENST00000607135 526 ntBASIC0.61□□□□□ -2.31
HMGXB3Q12766 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGXB3Q12766 AC083865.1-201ENST00000636634 831 ntBASIC0.61□□□□□ -2.31
HMGXB3Q12766 SNORD95.1-201ENST00000364099 68 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 RNU6-741P-201ENST00000383889 107 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 MIR514A1-201ENST00000385133 98 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 MIR1283-2-201ENST00000408621 87 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 RNU2-15P-201ENST00000410692 191 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AC006461.1-201ENST00000412637 326 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 MTCO2P20-201ENST00000437339 673 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AL135790.2-201ENST00000437701 267 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AC098831.1-201ENST00000440661 216 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 KATNBL1P6-201ENST00000453433 915 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 snoU13.11-201ENST00000459219 104 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 SNORD124-201ENST00000459577 104 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 RNU7-40P-201ENST00000516397 64 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 SNORD19.2-201ENST00000516978 73 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 ZNF705CP-201ENST00000530515 889 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 RAB11AP2-201ENST00000545905 639 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AC092953.2-201ENST00000608000 699 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AP003400.6-201ENST00000624698 740 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 AC092608.3-201ENST00000625017 386 ntBASIC0.6□□□□□ -2.31
HMGXB3Q12766 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGXB3Q12766 RNA5SP98-201ENST00000363158 137 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 RNU6-48P-201ENST00000384161 107 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 MIR95-201ENST00000385072 81 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.59□□□□□ -2.31
HMGXB3Q12766 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGXB3Q12766 USP9YP24-201ENST00000434374 697 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 MTND1P33-201ENST00000446251 917 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.59□□□□□ -2.31
HMGXB3Q12766 RPL30P7-201ENST00000479312 323 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 AL049874.1-201ENST00000489560 388 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 RNA5SP67-201ENST00000516422 131 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 RNA5SP404-201ENST00000517118 132 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.59□□□□□ -2.31
HMGXB3Q12766 AC009268.1-201ENST00000561352 1203 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 AL359314.1-201ENST00000616913 261 ntBASIC0.59□□□□□ -2.31
HMGXB3Q12766 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
HMGXB3Q12766 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
HMGXB3Q12766 MTCO1P56-201ENST00000401674 224 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 Y_RNA.610-201ENST00000410681 103 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.59□□□□□ -2.32
HMGXB3Q12766 RPL23AP95-201ENST00000426806 265 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.59□□□□□ -2.32
HMGXB3Q12766 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.59□□□□□ -2.32
HMGXB3Q12766 RNU6-491P-201ENST00000516099 110 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 AC006518.2-201ENST00000542513 940 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 AL359212.1-201ENST00000556608 614 ntBASIC0.59□□□□□ -2.32
HMGXB3Q12766 Y_RNA.35-201ENST00000362601 101 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 RNU6-271P-201ENST00000363858 105 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 USP9YP19-201ENST00000412165 485 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.58□□□□□ -2.32
HMGXB3Q12766 USP9YP13-201ENST00000417797 480 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC006512.1-201ENST00000468816 291 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.58□□□□□ -2.32
HMGXB3Q12766 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC027104.1-201ENST00000563702 681 ntBASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
HMGXB3Q12766 AC013410.2-201ENST00000422627 201 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.57□□□□□ -2.32
HMGXB3Q12766 RNU4-77P-201ENST00000516692 156 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 CYB5AP5-201ENST00000549779 389 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AC090115.3-201ENST00000553218 849 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AC021739.1-201ENST00000559631 174 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 MIR5190-201ENST00000581537 80 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AP005229.2-201ENST00000609980 697 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AC007490.1-201ENST00000624321 703 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.57□□□□□ -2.32
HMGXB3Q12766 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.57□□□□□ -2.32
HMGXB3Q12766 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.56□□□□□ -2.32
HMGXB3Q12766 SNORD115-3-201ENST00000363100 82 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 RNU1-36P-201ENST00000365130 165 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 MRPL35P1-201ENST00000404272 572 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 NDUFS5P4-201ENST00000412983 318 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.56□□□□□ -2.32
HMGXB3Q12766 PRELID3BP1-201ENST00000457142 540 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 SNORA31.22-201ENST00000517204 135 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.56□□□□□ -2.32
HMGXB3Q12766 AP003066.2-201ENST00000529375 555 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 AP003034.1-201ENST00000534621 422 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.56□□□□□ -2.32
HMGXB3Q12766 AC002400.1-201ENST00000569310 726 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 AC005261.5-201ENST00000596280 355 ntBASIC0.56□□□□□ -2.32
HMGXB3Q12766 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HMGXB3Q12766 MIR421-201ENST00000365696 85 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HMGXB3Q12766 RNU6-26P-201ENST00000383985 107 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 RNA5SP501-201ENST00000410990 112 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 USP9YP26-201ENST00000421008 661 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 USP9YP18-201ENST00000425912 695 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 USP9YP17-201ENST00000444617 696 ntBASIC0.55□□□□□ -2.32
HMGXB3Q12766 AC245102.2-201ENST00000448956 180 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms