Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRMT112P2-201ENST00000512910 132 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H1AQ02539 ACA64.5-201ENST00000516207 127 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 RN7SKP256-201ENST00000517201 314 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.62□□□□□ -2.31
HIST1H1AQ02539 AF038458.1-201ENST00000588406 262 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 VN1R107P-201ENST00000601784 209 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 FAM71BP1-201ENST00000604431 523 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 BX284668.6-201ENST00000606899 438 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 MIR6857-201ENST00000613267 93 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
HIST1H1AQ02539 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 RNU6-1010P-201ENST00000362757 107 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 RNU6-1080P-201ENST00000383982 107 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 MTND4LP14-201ENST00000429447 288 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 OR2AQ1P-201ENST00000451972 200 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 TMEM251P1-201ENST00000503717 318 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 MIR3169-201ENST00000578032 83 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC090970.3-201ENST00000612566 866 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H1AQ02539 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AL133216.2-202ENST00000634512 349 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC092447.10-201ENST00000620607 1652 ntBASIC0.61□□□□□ -2.31
HIST1H1AQ02539 AC100821.1-201ENST00000523153 2479 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RNU6-529P-201ENST00000363383 104 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RNA5SP493-201ENST00000364115 91 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 SNORA18.2-201ENST00000383865 132 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 MIR186-201ENST00000384988 86 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RNU6-360P-201ENST00000390944 104 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RPS15AP12-201ENST00000419498 388 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 BRK1P2-201ENST00000442875 223 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 MTCO3P45-201ENST00000443036 613 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AL163195.1-201ENST00000496941 348 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC005840.1-201ENST00000498412 377 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 MTCYBP40-201ENST00000509390 1135 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC108078.2-201ENST00000510750 236 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RNU6-991P-201ENST00000516168 107 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RN7SKP265-201ENST00000516448 223 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 SNORA31.16-201ENST00000516773 139 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RNU6-714P-201ENST00000516963 103 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.6□□□□□ -2.31
HIST1H1AQ02539 AC008945.2-201ENST00000606056 604 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 U6.99-201ENST00000637524 83 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 MIR1322-201ENST00000638013 71 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 MTND5P35-201ENST00000557537 1720 ntBASIC0.6□□□□□ -2.31
HIST1H1AQ02539 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 Y_RNA.338-201ENST00000365320 114 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 RNU6-296P-201ENST00000384608 107 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 RNU6-575P-201ENST00000411326 105 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC092427.1-201ENST00000439177 601 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC093259.1-201ENST00000509755 300 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AF131216.2-201ENST00000512316 564 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 PSMC1P5-201ENST00000512850 177 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 CYCSP23-201ENST00000519781 313 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AP000907.2-201ENST00000530827 353 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 MIR4498-201ENST00000577599 66 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC015688.6-201ENST00000577737 104 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 MIR4782-201ENST00000577987 79 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC130454.1-201ENST00000622948 401 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 AC009033.1-201ENST00000624279 431 ntBASIC0.59□□□□□ -2.31
HIST1H1AQ02539 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.59□□□□□ -2.31
HIST1H1AQ02539 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
HIST1H1AQ02539 RNU6-14P-201ENST00000384630 106 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 RNU11-5P-201ENST00000391216 129 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 DHFRP6-201ENST00000401776 268 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.58□□□□□ -2.32
HIST1H1AQ02539 MTND2P4-201ENST00000445034 1004 ntBASIC0.58□□□□□ -2.32
HIST1H1AQ02539 AC132479.1-201ENST00000449160 144 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms