Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 MTATP6P16-201ENST00000434543 526 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC124916.1-201ENST00000444020 547 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 MTND4P2-201ENST00000507767 1203 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC117522.1-201ENST00000509821 380 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 Vault.3-201ENST00000516676 95 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 MIR514B-201ENST00000516774 80 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 OSBPL9P5-201ENST00000542581 171 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC137800.2-201ENST00000574375 120 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 Z94722.1-201ENST00000604328 474 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC087241.4-201ENST00000612441 480 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC012409.4-201ENST00000612923 249 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AP001486.3-201ENST00000615334 372 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC108479.2-201ENST00000617314 601 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMGCS1Q01581 FGF7P2-201ENST00000332473 296 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 SNORD3E-201ENST00000362899 217 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNY1P12-201ENST00000364251 105 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNU6-1280P-201ENST00000365211 107 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNU6-61P-201ENST00000365528 109 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL160275.3-201ENST00000423876 471 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC073614.1-201ENST00000438690 650 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 RPS15AP9-201ENST00000439856 381 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL031667.1-201ENST00000440222 725 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL078601.1-201ENST00000444542 271 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL583843.1-201ENST00000456070 346 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 SNRPFP4-201ENST00000456366 242 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNA5SP269-201ENST00000459032 137 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 snoU109.1-201ENST00000459339 135 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 SNORD42A-201ENST00000459584 64 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AP001324.2-201ENST00000461163 319 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC011005.2-201ENST00000487324 359 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC023194.1-201ENST00000493084 308 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC090572.1-201ENST00000519251 160 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 FAM92A1P1-201ENST00000528023 890 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC135279.1-201ENST00000543493 504 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 ADI1P3-201ENST00000549509 470 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL133241.1-201ENST00000556832 487 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AC105245.1-201ENST00000581934 244 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 SEPT7P9-203ENST00000604116 343 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AP001506.1-201ENST00000615444 211 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 AL359547.2-201ENST00000615810 418 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGCS1Q01581 TEX21P-201ENST00000447107 1476 ntBASIC1.87□□□□□ -2.11
HMGCS1Q01581 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGCS1Q01581 HSPA8P4-201ENST00000511877 1920 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMGCS1Q01581 SNORD116-8-201ENST00000384365 95 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 MIR147B-201ENST00000390185 80 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL133475.1-201ENST00000404414 305 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 RNU6-248P-201ENST00000410720 107 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC016831.2-201ENST00000417179 352 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 BX295541.1-201ENST00000417774 250 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 BX276092.3-201ENST00000424182 230 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 CALM2P2-201ENST00000428512 440 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 RPL31P35-201ENST00000431058 377 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 PSPHP1-201ENST00000450062 261 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 BTF3P15-201ENST00000455606 336 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC092436.1-201ENST00000506450 503 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms