Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 Y_RNA.654-201ENST00000497848 106 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 RNU6-488P-201ENST00000515918 99 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.17□□□□□ -2.38
PRKDCP78527 BNIP3P23-201ENST00000599655 511 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 Pinc.1-201ENST00000616452 154 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
PRKDCP78527 BTF3P8-201ENST00000414577 526 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.17□□□□□ -2.38
PRKDCP78527 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.17□□□□□ -2.38
PRKDCP78527 GTF2IP20-201ENST00000431663 360 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AC068135.1-201ENST00000446164 246 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.17□□□□□ -2.38
PRKDCP78527 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.17□□□□□ -2.38
PRKDCP78527 HAUS1P3-201ENST00000523909 662 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.17□□□□□ -2.38
PRKDCP78527 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.17□□□□□ -2.38
PRKDCP78527 MIR548AX-201ENST00000580117 73 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AL391597.1-201ENST00000618707 694 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 RNU6-611P-201ENST00000384276 104 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 RPS3AP36-201ENST00000398190 775 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AL117342.1-201ENST00000404861 406 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 NDUFS5P1-201ENST00000405668 289 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.17□□□□□ -2.38
PRKDCP78527 FO393419.3-201ENST00000428741 282 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.17□□□□□ -2.38
PRKDCP78527 NRON-201ENST00000517270 370 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 AC011939.3-201ENST00000613686 466 ntBASIC0.17□□□□□ -2.38
PRKDCP78527 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.17□□□□□ -2.38
PRKDCP78527 RNU6-98P-201ENST00000384173 107 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 SNORA25-201ENST00000384384 134 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 MIR218-1-201ENST00000384999 110 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 MIR888-201ENST00000401186 77 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 RPL26P27-201ENST00000414397 437 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.16□□□□□ -2.38
PRKDCP78527 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 NANOGP2-201ENST00000435391 727 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC105758.1-201ENST00000506038 399 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC018659.1-201ENST00000551083 169 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC124947.2-202ENST00000552735 133 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC073544.2-201ENST00000601155 540 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC022202.1-201ENST00000613515 211 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 uc_338.15-201ENST00000615470 191 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 FARSBP1-201ENST00000435808 1778 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 OR5T3-201ENST00000303059 1023 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 RNA5SP361-201ENST00000362686 118 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 RNU6-730P-201ENST00000383954 104 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 MIR518D-201ENST00000385014 87 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.16□□□□□ -2.38
PRKDCP78527 SNORA3.4-201ENST00000515969 96 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC090578.1-201ENST00000604955 591 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC004908.3-201ENST00000610248 625 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.16□□□□□ -2.38
PRKDCP78527 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
PRKDCP78527 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.16□□□□□ -2.38
PRKDCP78527 TAAR7P-201ENST00000436141 242 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 TRBVA-201ENST00000498804 316 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC111000.5-201ENST00000506559 1178 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 SNORD19.2-201ENST00000516978 73 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AP003034.1-201ENST00000534621 422 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 NACAP3-201ENST00000552100 481 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 MIR378F-201ENST00000578143 78 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC021171.1-201ENST00000603137 706 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 AC123767.1-202ENST00000620407 817 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 MTND2P41-201ENST00000637599 773 ntBASIC0.16□□□□□ -2.38
PRKDCP78527 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.15□□□□□ -2.38
PRKDCP78527 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.15□□□□□ -2.38
PRKDCP78527 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.15□□□□□ -2.38
PRKDCP78527 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.15□□□□□ -2.38
PRKDCP78527 MTCO3P2-201ENST00000457365 171 ntBASIC0.15□□□□□ -2.38
PRKDCP78527 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.38
PRKDCP78527 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
PRKDCP78527 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.15□□□□□ -2.38
PRKDCP78527 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.15□□□□□ -2.38
PRKDCP78527 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.15□□□□□ -2.38
PRKDCP78527 AL391813.1-201ENST00000603098 260 ntBASIC0.15□□□□□ -2.38
PRKDCP78527 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.15□□□□□ -2.38
PRKDCP78527 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
PRKDCP78527 U3.9-201ENST00000363823 204 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 MIR649-201ENST00000384843 97 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 MIR938-201ENST00000401216 83 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RNA5SP501-201ENST00000410990 112 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AC092047.1-201ENST00000424997 240 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RSU1P2-202ENST00000437884 485 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AC069257.2-201ENST00000441819 155 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RNA5SP137-201ENST00000516833 135 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 Y_RNA.185-201ENST00000363894 100 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RNU6-923P-201ENST00000364753 107 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RNU6-452P-201ENST00000384406 107 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 MIR608-201ENST00000384820 100 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
PRKDCP78527 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 PIGFP2-201ENST00000421400 651 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.15□□□□□ -2.39
PRKDCP78527 Y_RNA.659-201ENST00000515994 113 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AC018638.7-201ENST00000605836 1114 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AL138726.1-201ENST00000614873 333 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AC011155.2-201ENST00000623202 216 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms