Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR3937-201ENST00000580135 106 ntBASIC0.43□□□□□ -2.34
UBA52P62987 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.43□□□□□ -2.34
UBA52P62987 AL031775.1-201ENST00000607014 887 ntBASIC0.43□□□□□ -2.34
UBA52P62987 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
UBA52P62987 AC004067.1-201ENST00000608733 700 ntBASIC0.43□□□□□ -2.34
UBA52P62987 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.43□□□□□ -2.34
UBA52P62987 GDI2P1-201ENST00000429312 1336 ntBASIC0.42□□□□□ -2.34
UBA52P62987 AC127391.1-201ENST00000411737 98 ntBASIC0.42□□□□□ -2.34
UBA52P62987 USP9YP19-201ENST00000412165 485 ntBASIC0.42□□□□□ -2.34
UBA52P62987 USP9YP13-201ENST00000417797 480 ntBASIC0.42□□□□□ -2.34
UBA52P62987 PTGES3P1-201ENST00000439531 483 ntBASIC0.42□□□□□ -2.34
UBA52P62987 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.42□□□□□ -2.34
UBA52P62987 RPS20P10-201ENST00000451209 253 ntBASIC0.42□□□□□ -2.34
UBA52P62987 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.42□□□□□ -2.34
UBA52P62987 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.42□□□□□ -2.34
UBA52P62987 RPL36AP48-201ENST00000485521 314 ntBASIC0.42□□□□□ -2.34
UBA52P62987 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.42□□□□□ -2.34
UBA52P62987 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.42□□□□□ -2.34
UBA52P62987 AC079598.5-201ENST00000547460 117 ntBASIC0.42□□□□□ -2.34
UBA52P62987 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.42□□□□□ -2.34
UBA52P62987 ADAM3B-201ENST00000569937 840 ntBASIC0.42□□□□□ -2.34
UBA52P62987 OR4G3P-201ENST00000633500 913 ntBASIC0.42□□□□□ -2.34
UBA52P62987 Y_RNA.251-201ENST00000364551 99 ntBASIC0.41□□□□□ -2.34
UBA52P62987 SNRPEP7-201ENST00000438350 220 ntBASIC0.41□□□□□ -2.34
UBA52P62987 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.41□□□□□ -2.34
UBA52P62987 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.41□□□□□ -2.34
UBA52P62987 CYCSP23-201ENST00000519781 313 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC005951.2-201ENST00000576282 495 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC112220.3-201ENST00000605502 502 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC024257.5-201ENST00000612739 531 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC040896.1-201ENST00000613819 479 ntBASIC0.41□□□□□ -2.34
UBA52P62987 AC068700.1-201ENST00000565862 3754 ntBASIC0.41□□□□□ -2.34
UBA52P62987 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
UBA52P62987 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.4□□□□□ -2.35
UBA52P62987 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.4□□□□□ -2.35
UBA52P62987 AC083875.1-201ENST00000419509 405 ntBASIC0.4□□□□□ -2.35
UBA52P62987 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
UBA52P62987 HSPE1P13-201ENST00000451143 297 ntBASIC0.4□□□□□ -2.35
UBA52P62987 TRBVA-201ENST00000498804 316 ntBASIC0.4□□□□□ -2.35
UBA52P62987 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.4□□□□□ -2.35
UBA52P62987 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
UBA52P62987 AC027104.1-201ENST00000563702 681 ntBASIC0.4□□□□□ -2.35
UBA52P62987 BNIP3P16-201ENST00000589779 534 ntBASIC0.4□□□□□ -2.35
UBA52P62987 CLIC4P2-201ENST00000601934 717 ntBASIC0.4□□□□□ -2.35
UBA52P62987 AC017037.3-201ENST00000625016 472 ntBASIC0.4□□□□□ -2.35
UBA52P62987 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
UBA52P62987 RNA5SP511-201ENST00000410487 115 ntBASIC0.39□□□□□ -2.35
UBA52P62987 AL353621.1-201ENST00000418219 243 ntBASIC0.39□□□□□ -2.35
UBA52P62987 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.39□□□□□ -2.35
UBA52P62987 AL353706.1-201ENST00000436728 494 ntBASIC0.39□□□□□ -2.35
UBA52P62987 PRELID3BP1-201ENST00000457142 540 ntBASIC0.39□□□□□ -2.35
UBA52P62987 COX7A2P2-201ENST00000505291 250 ntBASIC0.39□□□□□ -2.35
UBA52P62987 AP003355.1-201ENST00000518956 587 ntBASIC0.39□□□□□ -2.35
UBA52P62987 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.39□□□□□ -2.35
UBA52P62987 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.39□□□□□ -2.35
UBA52P62987 AC008751.2-201ENST00000597885 980 ntBASIC0.39□□□□□ -2.35
UBA52P62987 AP000860.1-201ENST00000605250 559 ntBASIC0.39□□□□□ -2.35
UBA52P62987 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
UBA52P62987 MIR1302-8-201ENST00000408342 128 ntBASIC0.38□□□□□ -2.35
UBA52P62987 MIR1197-201ENST00000408818 88 ntBASIC0.38□□□□□ -2.35
UBA52P62987 RNA5SP127-201ENST00000411051 133 ntBASIC0.38□□□□□ -2.35
UBA52P62987 FAM204CP-201ENST00000424489 642 ntBASIC0.38□□□□□ -2.35
UBA52P62987 PTGES3P4-201ENST00000426243 356 ntBASIC0.38□□□□□ -2.35
UBA52P62987 PSMA6P3-201ENST00000428242 164 ntBASIC0.38□□□□□ -2.35
UBA52P62987 SNRPEP9-201ENST00000436794 238 ntBASIC0.38□□□□□ -2.35
UBA52P62987 HMGN2P9-201ENST00000476875 229 ntBASIC0.38□□□□□ -2.35
UBA52P62987 BET1P1-201ENST00000482276 359 ntBASIC0.38□□□□□ -2.35
UBA52P62987 AK3P2-201ENST00000507976 429 ntBASIC0.38□□□□□ -2.35
UBA52P62987 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
UBA52P62987 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.38□□□□□ -2.35
UBA52P62987 AC012213.3-201ENST00000577199 777 ntBASIC0.38□□□□□ -2.35
UBA52P62987 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.38□□□□□ -2.35
UBA52P62987 AL020997.3-201ENST00000602843 359 ntBASIC0.38□□□□□ -2.35
UBA52P62987 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.38□□□□□ -2.35
UBA52P62987 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.38□□□□□ -2.35
UBA52P62987 AC009033.1-201ENST00000624279 431 ntBASIC0.38□□□□□ -2.35
UBA52P62987 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
UBA52P62987 AC138393.1-203ENST00000327086 343 ntBASIC0.37□□□□□ -2.35
UBA52P62987 RNA5SP257-201ENST00000363023 116 ntBASIC0.37□□□□□ -2.35
UBA52P62987 RNU6-1065P-201ENST00000384513 106 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AL121978.1-201ENST00000402778 359 ntBASIC0.37□□□□□ -2.35
UBA52P62987 VN1R42P-201ENST00000424651 344 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.37□□□□□ -2.35
UBA52P62987 MTCO3P5-201ENST00000433620 714 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.37□□□□□ -2.35
UBA52P62987 OR2AQ1P-201ENST00000451972 200 ntBASIC0.37□□□□□ -2.35
UBA52P62987 RPL26P26-201ENST00000480251 434 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.37□□□□□ -2.35
UBA52P62987 PTP4A1P4-201ENST00000512479 322 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.37□□□□□ -2.35
UBA52P62987 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.37□□□□□ -2.35
UBA52P62987 AC242628.1-201ENST00000606810 391 ntBASIC0.37□□□□□ -2.35
UBA52P62987 AL132822.1-201ENST00000617063 513 ntBASIC0.37□□□□□ -2.35
UBA52P62987 MTND5P11-201ENST00000511037 1812 ntBASIC0.36□□□□□ -2.35
UBA52P62987 RNU6-222P-201ENST00000362438 107 ntBASIC0.36□□□□□ -2.35
UBA52P62987 RNU6-611P-201ENST00000384276 104 ntBASIC0.36□□□□□ -2.35
UBA52P62987 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
UBA52P62987 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.36□□□□□ -2.35
UBA52P62987 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms