Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 NDUFB9P3-201ENST00000521269 501 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.95□□□□□ -1.78
HERVK_113P62684 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.95□□□□□ -1.78
HERVK_113P62684 AL117187.1-201ENST00000555482 181 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 HMGB1P14-201ENST00000557424 591 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AC008269.2-201ENST00000561915 1105 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 AL137843.1-201ENST00000605078 385 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 RNU6-6P-201ENST00000606623 107 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.95□□□□□ -1.78
HERVK_113P62684 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.95□□□□□ -1.78
HERVK_113P62684 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERVK_113P62684 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.95□□□□□ -1.78
HERVK_113P62684 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
HERVK_113P62684 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.94□□□□□ -1.78
HERVK_113P62684 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AL592148.1-201ENST00000413568 445 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.94□□□□□ -1.78
HERVK_113P62684 AL133396.1-201ENST00000432048 687 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.94□□□□□ -1.78
HERVK_113P62684 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AC113155.1-201ENST00000511141 769 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AC025755.1-201ENST00000521306 278 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 MIR4425-201ENST00000580572 84 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AC006557.5-201ENST00000603126 811 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 AC092447.9-201ENST00000603395 144 ntBASIC3.94□□□□□ -1.78
HERVK_113P62684 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.94□□□□□ -1.78
HERVK_113P62684 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HERVK_113P62684 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HERVK_113P62684 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
HERVK_113P62684 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.94□□□□□ -1.78
HERVK_113P62684 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERVK_113P62684 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERVK_113P62684 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HERVK_113P62684 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.93□□□□□ -1.78
HERVK_113P62684 Y_RNA.48-201ENST00000362710 103 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 RNU6-384P-201ENST00000364900 104 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 RNU6-741P-201ENST00000383889 107 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 SNORA41-201ENST00000384675 132 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HERVK_113P62684 AL357075.1-201ENST00000404107 726 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 RNU2-33P-201ENST00000410344 192 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.93□□□□□ -1.78
HERVK_113P62684 BX276092.3-201ENST00000424182 230 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AC007560.1-201ENST00000426912 237 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AL158071.1-201ENST00000430315 461 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.93□□□□□ -1.78
HERVK_113P62684 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.93□□□□□ -1.78
HERVK_113P62684 IPO7P1-201ENST00000442031 636 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AC139453.3-201ENST00000493276 369 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AC110794.1-201ENST00000505816 425 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.93□□□□□ -1.78
HERVK_113P62684 ACA59.1-201ENST00000515966 143 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 RNU6-1231P-201ENST00000517185 103 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.93□□□□□ -1.78
HERVK_113P62684 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.93□□□□□ -1.78
HERVK_113P62684 COX6CP5-201ENST00000527162 228 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 TRAV32-201ENST00000553993 340 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 MIR4273-201ENST00000582824 84 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AL591516.1-201ENST00000611326 274 ntBASIC3.93□□□□□ -1.78
HERVK_113P62684 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.93□□□□□ -1.78
HERVK_113P62684 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERVK_113P62684 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
HERVK_113P62684 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERVK_113P62684 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
HERVK_113P62684 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HERVK_113P62684 Y_RNA.557-201ENST00000384680 107 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HERVK_113P62684 U3.26-201ENST00000391236 204 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 RNU2-37P-201ENST00000410695 177 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERVK_113P62684 MRPS18CP6-201ENST00000423587 223 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 AC006989.1-201ENST00000427212 131 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 AC096644.2-201ENST00000429278 159 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 AL353997.1-201ENST00000432936 108 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 VDAC1P3-201ENST00000434069 851 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 DAP3P1-201ENST00000441522 278 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.92□□□□□ -1.78
HERVK_113P62684 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.92□□□□□ -1.78
HERVK_113P62684 RNA5SP165-201ENST00000517142 115 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 RN7SKP289-201ENST00000517244 295 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERVK_113P62684 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.92□□□□□ -1.78
HERVK_113P62684 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.92□□□□□ -1.78
HERVK_113P62684 AC110741.2-201ENST00000605278 268 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 MIR3976-201ENST00000606807 139 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 AC010205.1-201ENST00000616668 449 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 AC087588.2-201ENST00000617667 426 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HERVK_113P62684 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HERVK_113P62684 AC008568.2-201ENST00000623862 2313 ntBASIC3.92□□□□□ -1.78
HERVK_113P62684 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 RNA5SP197-201ENST00000363357 119 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 Y_RNA.314-201ENST00000365114 102 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.91□□□□□ -1.78
HERVK_113P62684 AP002088.1-201ENST00000382740 395 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 MIR10A-201ENST00000385043 110 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms