Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC021739.1-201ENST00000559631 174 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN20P56880 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN20P56880 CTHRC1P1-201ENST00000605383 469 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLDN20P56880 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN20P56880 ADAM3A-203ENST00000461344 2157 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN20P56880 SNORA72.1-201ENST00000363485 129 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RNU6-898P-201ENST00000365627 104 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 Y_RNA.414-201ENST00000384011 101 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RNU6-72P-201ENST00000384285 79 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RNU6-510P-201ENST00000391239 108 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN20P56880 AC023141.4-201ENST00000412031 328 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.74□□□□□ -1.97
CLDN20P56880 SAR1AP4-201ENST00000429225 591 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AC098614.3-201ENST00000438957 440 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN20P56880 RPL7P12-201ENST00000446719 750 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 RNU7-138P-201ENST00000459479 64 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 AC113155.1-201ENST00000511141 769 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RN7SKP272-201ENST00000516988 232 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 RN7SKP256-201ENST00000517201 314 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AC087854.1-201ENST00000519706 414 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AC087241.2-201ENST00000535801 324 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.74□□□□□ -1.97
CLDN20P56880 MIR5692C1-201ENST00000585309 91 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 APOOP1-201ENST00000604695 592 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN20P56880 AL121757.2-201ENST00000611223 313 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 AC009248.2-201ENST00000619826 254 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 Z69720.2-201ENST00000624755 279 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 SCARNA4-202ENST00000625402 129 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 MIR3199-2-201ENST00000636243 86 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN20P56880 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN20P56880 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN20P56880 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN20P56880 CDC27P3-201ENST00000635418 1910 ntBASIC2.74□□□□□ -1.97
CLDN20P56880 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN20P56880 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN20P56880 CBX3P1-201ENST00000325243 554 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 RNU6-799P-201ENST00000363567 107 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 SNORA71.1-201ENST00000364523 117 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 SNORA32.2-201ENST00000384049 122 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 RNU6-767P-201ENST00000384132 107 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 Z92545.1-201ENST00000411782 234 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AC016831.2-201ENST00000417179 352 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 MTCO3P46-201ENST00000425787 232 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN20P56880 MTCO2P3-201ENST00000442543 421 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN20P56880 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN20P56880 PMCHL2-203ENST00000457791 237 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 S100A11P2-201ENST00000467589 312 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 RN7SL20P-201ENST00000488827 297 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN20P56880 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN20P56880 AC107953.1-201ENST00000522216 297 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN20P56880 AC005730.3-201ENST00000583067 366 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 NUTF2P8-201ENST00000604593 363 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AL357078.3-201ENST00000607528 618 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN20P56880 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN20P56880 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN20P56880 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN20P56880 AC008669.1-201ENST00000565823 2178 ntBASIC2.73□□□□□ -1.97
CLDN20P56880 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN20P56880 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN20P56880 AC073325.2-201ENST00000339545 159 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 RNU6-254P-201ENST00000363377 107 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 RNU1-105P-201ENST00000363470 161 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AL590004.2-201ENST00000404787 371 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 snoU109.2-201ENST00000459316 135 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC104472.2-201ENST00000469035 601 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC046134.1-201ENST00000514454 666 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 Y_RNA.687-201ENST00000516558 91 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 RNU6-323P-201ENST00000521915 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms