Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNU6-78P-201ENST00000362897 107 ntBASIC3.52□□□□□ -1.85
PER3P56645 RNU6-942P-201ENST00000363002 107 ntBASIC3.52□□□□□ -1.85
PER3P56645 Y_RNA.111-201ENST00000363248 100 ntBASIC3.52□□□□□ -1.85
PER3P56645 RNU6-639P-201ENST00000384074 107 ntBASIC3.52□□□□□ -1.85
PER3P56645 RNU6-1032P-201ENST00000384100 107 ntBASIC3.52□□□□□ -1.85
PER3P56645 MIR218-2-201ENST00000385006 110 ntBASIC3.52□□□□□ -1.85
PER3P56645 U3.37-201ENST00000408528 213 ntBASIC3.52□□□□□ -1.85
PER3P56645 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 AL035423.1-201ENST00000420331 213 ntBASIC3.52□□□□□ -1.85
PER3P56645 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.52□□□□□ -1.85
PER3P56645 AC008267.5-201ENST00000424928 265 ntBASIC3.52□□□□□ -1.85
PER3P56645 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
PER3P56645 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.52□□□□□ -1.85
PER3P56645 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
PER3P56645 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
PER3P56645 AC022447.4-201ENST00000504053 364 ntBASIC3.52□□□□□ -1.85
PER3P56645 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
PER3P56645 CBX3P8-201ENST00000532412 525 ntBASIC3.52□□□□□ -1.85
PER3P56645 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
PER3P56645 AC005476.1-201ENST00000554427 397 ntBASIC3.52□□□□□ -1.85
PER3P56645 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.52□□□□□ -1.85
PER3P56645 MIR3200-201ENST00000580767 85 ntBASIC3.52□□□□□ -1.85
PER3P56645 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.52□□□□□ -1.85
PER3P56645 BNIP3P16-201ENST00000589779 534 ntBASIC3.52□□□□□ -1.85
PER3P56645 AC008962.1-201ENST00000605729 304 ntBASIC3.52□□□□□ -1.85
PER3P56645 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.52□□□□□ -1.85
PER3P56645 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PER3P56645 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PER3P56645 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PER3P56645 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.52□□□□□ -1.85
PER3P56645 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
PER3P56645 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
PER3P56645 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PER3P56645 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PER3P56645 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 Y_RNA.145-201ENST00000363527 102 ntBASIC3.51□□□□□ -1.85
PER3P56645 RNU6-336P-201ENST00000364891 107 ntBASIC3.51□□□□□ -1.85
PER3P56645 RNU5E-7P-201ENST00000365290 117 ntBASIC3.51□□□□□ -1.85
PER3P56645 MIR183-201ENST00000384958 110 ntBASIC3.51□□□□□ -1.85
PER3P56645 RPS4XP3-201ENST00000398541 413 ntBASIC3.51□□□□□ -1.85
PER3P56645 RPS29P13-201ENST00000402041 169 ntBASIC3.51□□□□□ -1.85
PER3P56645 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 MRPS18CP6-201ENST00000423587 223 ntBASIC3.51□□□□□ -1.85
PER3P56645 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.51□□□□□ -1.85
PER3P56645 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
PER3P56645 RPL23AP62-201ENST00000463396 453 ntBASIC3.51□□□□□ -1.85
PER3P56645 RPS29P27-201ENST00000463711 170 ntBASIC3.51□□□□□ -1.85
PER3P56645 AC068781.1-201ENST00000488231 618 ntBASIC3.51□□□□□ -1.85
PER3P56645 RPL7P47-201ENST00000497299 556 ntBASIC3.51□□□□□ -1.85
PER3P56645 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 AC010265.1-201ENST00000513509 211 ntBASIC3.51□□□□□ -1.85
PER3P56645 RNU6-377P-201ENST00000515965 102 ntBASIC3.51□□□□□ -1.85
PER3P56645 ACA59.1-201ENST00000515966 143 ntBASIC3.51□□□□□ -1.85
PER3P56645 Y_RNA.661-201ENST00000516003 99 ntBASIC3.51□□□□□ -1.85
PER3P56645 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.51□□□□□ -1.85
PER3P56645 AC008737.2-201ENST00000599446 118 ntBASIC3.51□□□□□ -1.85
PER3P56645 MTND4LP5-201ENST00000605152 292 ntBASIC3.51□□□□□ -1.85
PER3P56645 AC005014.2-201ENST00000607795 599 ntBASIC3.51□□□□□ -1.85
PER3P56645 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.51□□□□□ -1.85
PER3P56645 AC083806.3-201ENST00000614016 455 ntBASIC3.51□□□□□ -1.85
PER3P56645 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 SCARNA4-202ENST00000625402 129 ntBASIC3.51□□□□□ -1.85
PER3P56645 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PER3P56645 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PER3P56645 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.51□□□□□ -1.85
PER3P56645 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PER3P56645 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.51□□□□□ -1.85
PER3P56645 IPO8P1-201ENST00000455509 3109 ntBASIC3.5□□□□□ -1.85
PER3P56645 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
PER3P56645 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PER3P56645 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
PER3P56645 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PER3P56645 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PER3P56645 RNA5SP399-201ENST00000364003 117 ntBASIC3.5□□□□□ -1.85
PER3P56645 RNU6-933P-201ENST00000384424 107 ntBASIC3.5□□□□□ -1.85
PER3P56645 U8.11-201ENST00000384699 133 ntBASIC3.5□□□□□ -1.85
PER3P56645 U8.12-201ENST00000384701 133 ntBASIC3.5□□□□□ -1.85
PER3P56645 RNU6-1106P-201ENST00000390845 107 ntBASIC3.5□□□□□ -1.85
PER3P56645 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.5□□□□□ -1.85
PER3P56645 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.5□□□□□ -1.85
PER3P56645 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.5□□□□□ -1.85
PER3P56645 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.5□□□□□ -1.85
PER3P56645 GSTA11P-201ENST00000452866 669 ntBASIC3.5□□□□□ -1.85
PER3P56645 U8.18-201ENST00000459285 133 ntBASIC3.5□□□□□ -1.85
PER3P56645 AC084357.1-201ENST00000473404 255 ntBASIC3.5□□□□□ -1.85
PER3P56645 AK3P2-201ENST00000507976 429 ntBASIC3.5□□□□□ -1.85
PER3P56645 RNU6-1046P-201ENST00000516538 107 ntBASIC3.5□□□□□ -1.85
PER3P56645 SNORA43.2-201ENST00000516652 128 ntBASIC3.5□□□□□ -1.85
PER3P56645 AP005902.1-201ENST00000521358 186 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms