Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC098614.4-201ENST00000607601 462 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC093788.1-201ENST00000609356 927 ntBASIC1.84□□□□□ -2.11
CDH6P55285 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC022960.3-201ENST00000619794 441 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC092192.1-201ENST00000633154 1018 ntBASIC1.84□□□□□ -2.11
CDH6P55285 AC103710.2-202ENST00000641454 2853 ntBASIC1.84□□□□□ -2.12
CDH6P55285 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH6P55285 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDH6P55285 MIR412-201ENST00000362142 91 ntBASIC1.83□□□□□ -2.12
CDH6P55285 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
CDH6P55285 Y_RNA.623-201ENST00000411128 95 ntBASIC1.83□□□□□ -2.12
CDH6P55285 RPL23AP39-201ENST00000415533 405 ntBASIC1.83□□□□□ -2.12
CDH6P55285 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH6P55285 AL365338.1-201ENST00000422282 858 ntBASIC1.83□□□□□ -2.12
CDH6P55285 AC008267.5-201ENST00000424928 265 ntBASIC1.83□□□□□ -2.12
CDH6P55285 HMGN2P3-201ENST00000433603 273 ntBASIC1.83□□□□□ -2.12
CDH6P55285 HMGN2P5-201ENST00000436882 273 ntBASIC1.83□□□□□ -2.12
CDH6P55285 RPL7P54-201ENST00000438336 674 ntBASIC1.83□□□□□ -2.12
CDH6P55285 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH6P55285 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
CDH6P55285 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH6P55285 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDH6P55285 TPT1P8-201ENST00000510120 555 ntBASIC1.83□□□□□ -2.12
CDH6P55285 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH6P55285 RNU7-51P-201ENST00000516560 62 ntBASIC1.83□□□□□ -2.12
CDH6P55285 AP003122.4-201ENST00000530980 758 ntBASIC1.83□□□□□ -2.12
CDH6P55285 IMMP1LP2-201ENST00000552954 492 ntBASIC1.83□□□□□ -2.12
CDH6P55285 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
CDH6P55285 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH6P55285 MIR3118-1-201ENST00000581787 76 ntBASIC1.83□□□□□ -2.12
CDH6P55285 BNIP3P30-201ENST00000601184 574 ntBASIC1.83□□□□□ -2.12
CDH6P55285 SNRPGP17-201ENST00000603780 214 ntBASIC1.83□□□□□ -2.12
CDH6P55285 ELOCP5-201ENST00000604924 333 ntBASIC1.83□□□□□ -2.12
CDH6P55285 AC024940.5-201ENST00000622889 474 ntBASIC1.83□□□□□ -2.12
CDH6P55285 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH6P55285 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH6P55285 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDH6P55285 RNU6-487P-201ENST00000365430 104 ntBASIC1.82□□□□□ -2.12
CDH6P55285 SNORA75B-201ENST00000384053 137 ntBASIC1.82□□□□□ -2.12
CDH6P55285 RNU6-533P-201ENST00000384144 107 ntBASIC1.82□□□□□ -2.12
CDH6P55285 MIR518A2-201ENST00000384966 87 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH6P55285 AL645568.3-201ENST00000433683 316 ntBASIC1.82□□□□□ -2.12
CDH6P55285 MTND6P13-201ENST00000443510 523 ntBASIC1.82□□□□□ -2.12
CDH6P55285 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH6P55285 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH6P55285 AL137159.1-201ENST00000452808 512 ntBASIC1.82□□□□□ -2.12
CDH6P55285 RPL21P99-201ENST00000480369 423 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AF131216.2-201ENST00000512316 564 ntBASIC1.82□□□□□ -2.12
CDH6P55285 RNU2-53P-201ENST00000516257 147 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AP004607.1-201ENST00000524456 203 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH6P55285 AC027807.1-201ENST00000559921 996 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH6P55285 AC025678.1-201ENST00000567861 338 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
CDH6P55285 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AC021646.1-201ENST00000605469 484 ntBASIC1.82□□□□□ -2.12
CDH6P55285 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH6P55285 AL359547.2-201ENST00000615810 418 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AC007671.2-201ENST00000637344 619 ntBASIC1.82□□□□□ -2.12
CDH6P55285 AC073343.1-201ENST00000328239 651 ntBASIC1.81□□□□□ -2.12
CDH6P55285 MIR186-201ENST00000384988 86 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC098592.1-201ENST00000419352 333 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AL627311.1-201ENST00000431514 115 ntBASIC1.81□□□□□ -2.12
CDH6P55285 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.81□□□□□ -2.12
CDH6P55285 AL606662.1-201ENST00000445763 553 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AL606517.1-201ENST00000446914 387 ntBASIC1.81□□□□□ -2.12
CDH6P55285 NDUFB1P2-201ENST00000449477 176 ntBASIC1.81□□□□□ -2.12
CDH6P55285 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDH6P55285 snoU13.26-201ENST00000459452 105 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH6P55285 HMGB1P30-201ENST00000492455 606 ntBASIC1.81□□□□□ -2.12
CDH6P55285 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC112204.1-201ENST00000502591 103 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH6P55285 AC135279.1-201ENST00000543493 504 ntBASIC1.81□□□□□ -2.12
CDH6P55285 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH6P55285 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.81□□□□□ -2.12
CDH6P55285 CR383656.8-201ENST00000549046 145 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC093249.1-201ENST00000567049 203 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC243960.4-201ENST00000600532 288 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC011458.1-201ENST00000604034 617 ntBASIC1.81□□□□□ -2.12
CDH6P55285 AC105129.3-201ENST00000605455 485 ntBASIC1.81□□□□□ -2.12
CDH6P55285 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH6P55285 uc_338.15-201ENST00000615470 191 ntBASIC1.81□□□□□ -2.12
CDH6P55285 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH6P55285 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH6P55285 RNU5F-6P-201ENST00000362979 116 ntBASIC1.8□□□□□ -2.12
CDH6P55285 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
CDH6P55285 SNORD115.1-201ENST00000391109 76 ntBASIC1.8□□□□□ -2.12
CDH6P55285 MIR1261-201ENST00000408659 82 ntBASIC1.8□□□□□ -2.12
CDH6P55285 SNORD56-201ENST00000413522 71 ntBASIC1.8□□□□□ -2.12
CDH6P55285 UBE2V1P10-201ENST00000414685 269 ntBASIC1.8□□□□□ -2.12
CDH6P55285 RPL22P18-201ENST00000417197 377 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH6P55285 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
CDH6P55285 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms