Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH4P55283 RN7SKP287-201ENST00000516546 266 ntBASIC1.95□□□□□ -2.1
CDH4P55283 RNA5SP337-201ENST00000517007 109 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH4P55283 AC110588.1-201ENST00000559699 137 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC136619.2-201ENST00000563361 631 ntBASIC1.95□□□□□ -2.1
CDH4P55283 BNIP3P30-201ENST00000601184 574 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC073410.2-201ENST00000603240 332 ntBASIC1.95□□□□□ -2.1
CDH4P55283 AC126118.1-201ENST00000607744 628 ntBASIC1.95□□□□□ -2.1
CDH4P55283 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
CDH4P55283 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH4P55283 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CDH4P55283 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH4P55283 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDH4P55283 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDH4P55283 RNU5F-6P-201ENST00000362979 116 ntBASIC1.94□□□□□ -2.1
CDH4P55283 SNORD56.2-201ENST00000363242 71 ntBASIC1.94□□□□□ -2.1
CDH4P55283 RNU1-23P-201ENST00000363361 144 ntBASIC1.94□□□□□ -2.1
CDH4P55283 RNU6-501P-201ENST00000364072 100 ntBASIC1.94□□□□□ -2.1
CDH4P55283 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
CDH4P55283 SNORD115.1-201ENST00000391109 76 ntBASIC1.94□□□□□ -2.1
CDH4P55283 Y_RNA.623-201ENST00000411128 95 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AL030996.1-201ENST00000411430 235 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.94□□□□□ -2.1
CDH4P55283 AC119618.1-201ENST00000434191 222 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AL512286.1-201ENST00000439244 400 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH4P55283 SNORA3.4-201ENST00000515969 96 ntBASIC1.94□□□□□ -2.1
CDH4P55283 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
CDH4P55283 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDH4P55283 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDH4P55283 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.94□□□□□ -2.1
CDH4P55283 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH4P55283 AC093424.1-201ENST00000604999 338 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AC105129.3-201ENST00000605455 485 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AP002360.4-201ENST00000606980 481 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AL359547.2-201ENST00000615810 418 ntBASIC1.94□□□□□ -2.1
CDH4P55283 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AC006927.3-201ENST00000638789 384 ntBASIC1.94□□□□□ -2.1
CDH4P55283 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CDH4P55283 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
CDH4P55283 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC073343.1-201ENST00000328239 651 ntBASIC1.93□□□□□ -2.1
CDH4P55283 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
CDH4P55283 SNORD3E-201ENST00000362899 217 ntBASIC1.93□□□□□ -2.1
CDH4P55283 U3.13-201ENST00000364804 214 ntBASIC1.93□□□□□ -2.1
CDH4P55283 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 RNU1-57P-201ENST00000384491 166 ntBASIC1.93□□□□□ -2.1
CDH4P55283 HMGN2P39-201ENST00000398005 273 ntBASIC1.93□□□□□ -2.1
CDH4P55283 RNU2-20P-201ENST00000410425 191 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC008267.5-201ENST00000424928 265 ntBASIC1.93□□□□□ -2.1
CDH4P55283 MTCYBP39-201ENST00000437562 491 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.93□□□□□ -2.1
CDH4P55283 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH4P55283 AL590365.1-201ENST00000450788 243 ntBASIC1.93□□□□□ -2.1
CDH4P55283 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 PMCHL2-203ENST00000457791 237 ntBASIC1.93□□□□□ -2.1
CDH4P55283 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AP000797.1-201ENST00000478870 387 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC034114.1-201ENST00000520293 285 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH4P55283 ZNF321P-202ENST00000550843 495 ntBASIC1.93□□□□□ -2.1
CDH4P55283 PCMTD1P2-201ENST00000565017 355 ntBASIC1.93□□□□□ -2.1
CDH4P55283 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
CDH4P55283 MIR5697-201ENST00000578045 78 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
CDH4P55283 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 AL353778.1-201ENST00000603149 408 ntBASIC1.93□□□□□ -2.1
CDH4P55283 AC004223.4-201ENST00000612426 332 ntBASIC1.93□□□□□ -2.1
CDH4P55283 MIR3529-201ENST00000637713 78 ntBASIC1.93□□□□□ -2.1
CDH4P55283 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CDH4P55283 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDH4P55283 AC009487.4-201ENST00000624969 3585 ntBASIC1.93□□□□□ -2.1
CDH4P55283 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.92□□□□□ -2.1
CDH4P55283 MIR412-201ENST00000362142 91 ntBASIC1.92□□□□□ -2.1
CDH4P55283 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
CDH4P55283 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
CDH4P55283 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH4P55283 UBE2V1P10-201ENST00000414685 269 ntBASIC1.92□□□□□ -2.1
CDH4P55283 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH4P55283 EPS15P1-201ENST00000448836 336 ntBASIC1.92□□□□□ -2.1
CDH4P55283 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH4P55283 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AC018868.1-201ENST00000491307 315 ntBASIC1.92□□□□□ -2.1
CDH4P55283 HMGB1P30-201ENST00000492455 606 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH4P55283 MTCYBP35-201ENST00000503630 1137 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.92□□□□□ -2.1
CDH4P55283 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH4P55283 RNU6-586P-201ENST00000517265 104 ntBASIC1.92□□□□□ -2.1
CDH4P55283 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CDH4P55283 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH4P55283 MTATP6P24-201ENST00000576835 677 ntBASIC1.92□□□□□ -2.1
CDH4P55283 DEFB131E-202ENST00000602581 683 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms