Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC093536.2-201ENST00000565257 1406 ntBASIC3.25□□□□□ -1.89
CDK7P50613 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.25□□□□□ -1.89
CDK7P50613 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDK7P50613 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CDK7P50613 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDK7P50613 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK7P50613 RNU6-778P-201ENST00000363269 103 ntBASIC3.24□□□□□ -1.89
CDK7P50613 RNU6-82P-201ENST00000363970 107 ntBASIC3.24□□□□□ -1.89
CDK7P50613 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK7P50613 Y_RNA.390-201ENST00000383932 102 ntBASIC3.24□□□□□ -1.89
CDK7P50613 SNORA75B-201ENST00000384053 137 ntBASIC3.24□□□□□ -1.89
CDK7P50613 SNORA40C-201ENST00000391285 128 ntBASIC3.24□□□□□ -1.89
CDK7P50613 SKA2P1-201ENST00000425592 390 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AL627311.1-201ENST00000431514 115 ntBASIC3.24□□□□□ -1.89
CDK7P50613 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK7P50613 MTATP6P7-201ENST00000453315 681 ntBASIC3.24□□□□□ -1.89
CDK7P50613 RN7SL20P-201ENST00000488827 297 ntBASIC3.24□□□□□ -1.89
CDK7P50613 RPS27AP10-201ENST00000496103 208 ntBASIC3.24□□□□□ -1.89
CDK7P50613 SNORA19.2-201ENST00000516013 114 ntBASIC3.24□□□□□ -1.89
CDK7P50613 SNORD59.2-201ENST00000516873 68 ntBASIC3.24□□□□□ -1.89
CDK7P50613 RNU6-273P-201ENST00000516937 96 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AC069113.1-201ENST00000517763 267 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK7P50613 LINC00933-203ENST00000559812 219 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK7P50613 AC005730.3-201ENST00000583067 366 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK7P50613 AL645944.1-201ENST00000603857 493 ntBASIC3.24□□□□□ -1.89
CDK7P50613 AC007938.3-201ENST00000604965 623 ntBASIC3.24□□□□□ -1.89
CDK7P50613 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDK7P50613 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
CDK7P50613 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK7P50613 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK7P50613 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDK7P50613 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK7P50613 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK7P50613 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CDK7P50613 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK7P50613 CBX3P1-201ENST00000325243 554 ntBASIC3.23□□□□□ -1.89
CDK7P50613 Y_RNA.324-201ENST00000365165 102 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RNU6-898P-201ENST00000365627 104 ntBASIC3.23□□□□□ -1.89
CDK7P50613 Y_RNA.399-201ENST00000383955 105 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RNU6-166P-201ENST00000384371 107 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RNU2-52P-201ENST00000410680 190 ntBASIC3.23□□□□□ -1.89
CDK7P50613 BMS1P22-201ENST00000414726 313 ntBASIC3.23□□□□□ -1.89
CDK7P50613 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK7P50613 AL353621.1-201ENST00000418219 243 ntBASIC3.23□□□□□ -1.89
CDK7P50613 SRIP2-201ENST00000428470 166 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RPL7P12-201ENST00000446719 750 ntBASIC3.23□□□□□ -1.89
CDK7P50613 SNORD109B-201ENST00000458961 67 ntBASIC3.23□□□□□ -1.89
CDK7P50613 SNORD109A-201ENST00000459128 67 ntBASIC3.23□□□□□ -1.89
CDK7P50613 HMGN2P26-201ENST00000463169 339 ntBASIC3.23□□□□□ -1.89
CDK7P50613 AC079140.5-201ENST00000507882 310 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RNU1-86P-201ENST00000516108 154 ntBASIC3.23□□□□□ -1.89
CDK7P50613 RNU1-107P-201ENST00000516617 154 ntBASIC3.23□□□□□ -1.89
CDK7P50613 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK7P50613 RNU6-323P-201ENST00000521915 107 ntBASIC3.23□□□□□ -1.89
CDK7P50613 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK7P50613 AC243972.3-201ENST00000539655 198 ntBASIC3.23□□□□□ -1.89
CDK7P50613 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK7P50613 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.23□□□□□ -1.89
CDK7P50613 AL359757.2-201ENST00000624309 274 ntBASIC3.23□□□□□ -1.89
CDK7P50613 AC243829.7-201ENST00000633081 225 ntBASIC3.23□□□□□ -1.89
CDK7P50613 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK7P50613 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDK7P50613 Y_RNA.100-201ENST00000363141 102 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNU6-266P-201ENST00000364225 107 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNA5SP354-201ENST00000391247 136 ntBASIC3.22□□□□□ -1.89
CDK7P50613 EIF4E2P1-201ENST00000393781 255 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNA5SP344-201ENST00000411081 104 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AL592148.1-201ENST00000413568 445 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RPLP0P7-201ENST00000416050 667 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK7P50613 HMGB1P9-201ENST00000429856 646 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
CDK7P50613 MTCO3P18-201ENST00000440206 761 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
CDK7P50613 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK7P50613 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNU1-41P-201ENST00000516161 162 ntBASIC3.22□□□□□ -1.89
CDK7P50613 Y_RNA.665-201ENST00000516177 98 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNU1-48P-201ENST00000516400 162 ntBASIC3.22□□□□□ -1.89
CDK7P50613 RNU6-703P-201ENST00000516946 107 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AL121579.1-201ENST00000555129 305 ntBASIC3.22□□□□□ -1.89
CDK7P50613 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK7P50613 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK7P50613 AC018638.8-201ENST00000588755 281 ntBASIC3.22□□□□□ -1.89
CDK7P50613 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
CDK7P50613 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
CDK7P50613 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDK7P50613 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDK7P50613 RNU6-858P-201ENST00000362436 107 ntBASIC3.21□□□□□ -1.9
CDK7P50613 U3.12-201ENST00000364498 214 ntBASIC3.21□□□□□ -1.9
CDK7P50613 SNORD14B-201ENST00000364533 90 ntBASIC3.21□□□□□ -1.9
CDK7P50613 RNU6-1280P-201ENST00000365211 107 ntBASIC3.21□□□□□ -1.9
CDK7P50613 MIR767-201ENST00000390228 109 ntBASIC3.21□□□□□ -1.9
CDK7P50613 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
CDK7P50613 RNU6-607P-201ENST00000411283 108 ntBASIC3.21□□□□□ -1.9
CDK7P50613 RPL21P111-201ENST00000418453 477 ntBASIC3.21□□□□□ -1.9
CDK7P50613 MYL8P-204ENST00000431574 518 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms