Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 Y_RNA.526-201ENST00000384572 110 ntBASIC3.46□□□□□ -1.86
CLK3P49761 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.46□□□□□ -1.86
CLK3P49761 RNU6-1156P-201ENST00000410365 100 ntBASIC3.46□□□□□ -1.86
CLK3P49761 NDUFB4P7-201ENST00000423198 363 ntBASIC3.46□□□□□ -1.86
CLK3P49761 AC073063.1-201ENST00000434352 607 ntBASIC3.46□□□□□ -1.86
CLK3P49761 RPL21P41-201ENST00000459863 264 ntBASIC3.46□□□□□ -1.86
CLK3P49761 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.46□□□□□ -1.86
CLK3P49761 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.46□□□□□ -1.86
CLK3P49761 MTND1P19-201ENST00000511780 315 ntBASIC3.46□□□□□ -1.86
CLK3P49761 RNU1-61P-201ENST00000516107 151 ntBASIC3.46□□□□□ -1.86
CLK3P49761 RNU7-4P-201ENST00000516961 62 ntBASIC3.46□□□□□ -1.86
CLK3P49761 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.46□□□□□ -1.86
CLK3P49761 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.46□□□□□ -1.86
CLK3P49761 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLK3P49761 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CLK3P49761 MIR5692A1-201ENST00000580523 69 ntBASIC3.46□□□□□ -1.86
CLK3P49761 AC098479.1-201ENST00000609225 154 ntBASIC3.46□□□□□ -1.86
CLK3P49761 MIR7153-201ENST00000637758 57 ntBASIC3.46□□□□□ -1.86
CLK3P49761 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLK3P49761 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
CLK3P49761 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLK3P49761 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLK3P49761 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLK3P49761 RNU6-1303P-201ENST00000364841 107 ntBASIC3.45□□□□□ -1.86
CLK3P49761 Y_RNA.518-201ENST00000384552 113 ntBASIC3.45□□□□□ -1.86
CLK3P49761 MIR493-201ENST00000385254 89 ntBASIC3.45□□□□□ -1.86
CLK3P49761 RNU2-38P-201ENST00000410856 79 ntBASIC3.45□□□□□ -1.86
CLK3P49761 YPEL5P1-201ENST00000419731 367 ntBASIC3.45□□□□□ -1.86
CLK3P49761 RPL17P36-201ENST00000420302 549 ntBASIC3.45□□□□□ -1.86
CLK3P49761 ELOCP20-201ENST00000422460 345 ntBASIC3.45□□□□□ -1.86
CLK3P49761 DAP3P1-201ENST00000441522 278 ntBASIC3.45□□□□□ -1.86
CLK3P49761 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.45□□□□□ -1.86
CLK3P49761 AL031274.1-201ENST00000450334 232 ntBASIC3.45□□□□□ -1.86
CLK3P49761 MTCO3P8-201ENST00000453691 755 ntBASIC3.45□□□□□ -1.86
CLK3P49761 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.45□□□□□ -1.86
CLK3P49761 RPL39P38-201ENST00000467018 153 ntBASIC3.45□□□□□ -1.86
CLK3P49761 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
CLK3P49761 AC018437.1-201ENST00000492214 406 ntBASIC3.45□□□□□ -1.86
CLK3P49761 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.45□□□□□ -1.86
CLK3P49761 SNORA25.11-201ENST00000515935 105 ntBASIC3.45□□□□□ -1.86
CLK3P49761 SNORA31.3-201ENST00000516029 96 ntBASIC3.45□□□□□ -1.86
CLK3P49761 RN7SKP258-201ENST00000517151 304 ntBASIC3.45□□□□□ -1.86
CLK3P49761 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.45□□□□□ -1.86
CLK3P49761 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.45□□□□□ -1.86
CLK3P49761 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLK3P49761 HSPE1P20-201ENST00000538133 289 ntBASIC3.45□□□□□ -1.86
CLK3P49761 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.45□□□□□ -1.86
CLK3P49761 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.45□□□□□ -1.86
CLK3P49761 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.45□□□□□ -1.86
CLK3P49761 RN7SL703P-201ENST00000578485 302 ntBASIC3.45□□□□□ -1.86
CLK3P49761 MIR5187-201ENST00000583479 76 ntBASIC3.45□□□□□ -1.86
CLK3P49761 AL591516.1-201ENST00000611326 274 ntBASIC3.45□□□□□ -1.86
CLK3P49761 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLK3P49761 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLK3P49761 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.45□□□□□ -1.86
CLK3P49761 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.45□□□□□ -1.86
CLK3P49761 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.45□□□□□ -1.86
CLK3P49761 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLK3P49761 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLK3P49761 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLK3P49761 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLK3P49761 RNA5SP515-201ENST00000364570 118 ntBASIC3.44□□□□□ -1.86
CLK3P49761 RNA5SP479-201ENST00000364858 117 ntBASIC3.44□□□□□ -1.86
CLK3P49761 Y_RNA.478-201ENST00000384358 107 ntBASIC3.44□□□□□ -1.86
CLK3P49761 RN7SKP202-201ENST00000410439 330 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AL513331.1-201ENST00000411908 397 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC139712.2-201ENST00000424302 339 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC092017.2-201ENST00000427600 362 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AL590383.1-201ENST00000428602 75 ntBASIC3.44□□□□□ -1.86
CLK3P49761 RPS3AP12-201ENST00000443616 753 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AL590664.1-201ENST00000448065 339 ntBASIC3.44□□□□□ -1.86
CLK3P49761 FCF1P4-201ENST00000448326 183 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CLK3P49761 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.44□□□□□ -1.86
CLK3P49761 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLK3P49761 AC010265.1-201ENST00000513509 211 ntBASIC3.44□□□□□ -1.86
CLK3P49761 RNU6-1256P-201ENST00000516539 103 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.44□□□□□ -1.86
CLK3P49761 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.44□□□□□ -1.86
CLK3P49761 AL160281.1-201ENST00000605307 311 ntBASIC3.44□□□□□ -1.86
CLK3P49761 RNU6-85P-201ENST00000605989 107 ntBASIC3.44□□□□□ -1.86
CLK3P49761 SNORA62.6-201ENST00000606322 83 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
CLK3P49761 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
CLK3P49761 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CLK3P49761 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
CLK3P49761 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
CLK3P49761 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 AL079305.1-201ENST00000623159 3008 ntBASIC3.43□□□□□ -1.86
CLK3P49761 RNU6-288P-201ENST00000363690 104 ntBASIC3.43□□□□□ -1.86
CLK3P49761 RNU4-50P-201ENST00000364361 141 ntBASIC3.43□□□□□ -1.86
CLK3P49761 RNU6-1093P-201ENST00000391194 107 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AP000567.1-201ENST00000406413 156 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AL030996.1-201ENST00000411430 235 ntBASIC3.43□□□□□ -1.86
CLK3P49761 RPL21P90-201ENST00000415692 466 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms