Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.79□□□□□ -2.12
CX3CR1P49238 MTND1P30-201ENST00000441241 901 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.79□□□□□ -2.12
CX3CR1P49238 USP9YP8-201ENST00000441913 500 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.79□□□□□ -2.12
CX3CR1P49238 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.79□□□□□ -2.12
CX3CR1P49238 MTND3P7-201ENST00000474435 343 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 MED28P2-201ENST00000475771 317 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC008413.1-201ENST00000511864 177 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 MIR514B-201ENST00000516774 80 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC034114.1-201ENST00000520293 285 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 FAM92A1P1-201ENST00000528023 890 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.79□□□□□ -2.12
CX3CR1P49238 AL512310.1-201ENST00000548639 172 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC005771.1-201ENST00000585581 349 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 AC093788.1-201ENST00000609356 927 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 RBBP8P1-201ENST00000449447 1844 ntBASIC1.79□□□□□ -2.12
CX3CR1P49238 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.79□□□□□ -2.12
CX3CR1P49238 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
CX3CR1P49238 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
CX3CR1P49238 KPNA2P1-201ENST00000458289 1591 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 RNU6-169P-201ENST00000365336 107 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 SNORA24.1-201ENST00000384401 135 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 RNU1-57P-201ENST00000384491 166 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CX3CR1P49238 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CX3CR1P49238 RPL23AP32-201ENST00000395315 459 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 Y_RNA.598-201ENST00000410480 95 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 RNU6-1140P-201ENST00000410517 106 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AL135786.1-201ENST00000415892 214 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AL365338.1-201ENST00000422282 858 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CR1P49238 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 USP9YP15-201ENST00000442391 422 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 RPS27AP8-201ENST00000452665 445 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 snoU109.2-201ENST00000459316 135 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 Y_RNA.672-201ENST00000516289 104 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 SCARNA24.1-201ENST00000516465 137 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CR1P49238 OR5AQ1P-201ENST00000527596 927 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 RANP3-201ENST00000530970 276 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 MTND3P12-201ENST00000559068 328 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CR1P49238 AL121992.2-201ENST00000606262 256 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC126118.1-201ENST00000607744 628 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AP000770.2-201ENST00000623694 100 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 AC019226.2-201ENST00000625973 424 ntBASIC1.78□□□□□ -2.12
CX3CR1P49238 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CX3CR1P49238 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CX3CR1P49238 MIR634-201ENST00000385208 97 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 RN7SKP32-201ENST00000410167 303 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 Y_RNA.623-201ENST00000411128 95 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 RPS3AP3-201ENST00000411933 242 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AL139156.1-201ENST00000412785 841 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AC092447.3-201ENST00000426027 686 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC027124.2-201ENST00000428249 105 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AC012308.1-201ENST00000451232 178 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CX3CR1P49238 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 HMGB1P35-201ENST00000503360 598 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 RBBP4P6-201ENST00000508098 202 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CR1P49238 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AF131215.7-201ENST00000602443 707 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC073410.2-201ENST00000603240 332 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AL359999.1-201ENST00000604513 294 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 ELOCP5-201ENST00000604924 333 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AL603755.1-201ENST00000619504 163 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.77□□□□□ -2.13
CX3CR1P49238 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.77□□□□□ -2.13
CX3CR1P49238 AC131280.1-202ENST00000624067 4211 ntBASIC1.77□□□□□ -2.13
CX3CR1P49238 AC103710.2-202ENST00000641454 2853 ntBASIC1.76□□□□□ -2.13
CX3CR1P49238 RNU6-843P-201ENST00000384454 104 ntBASIC1.76□□□□□ -2.13
CX3CR1P49238 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms