Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.87□□□□□ -2.11
RFX3P48380 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
RFX3P48380 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
RFX3P48380 AC012360.2-201ENST00000609349 391 ntBASIC1.87□□□□□ -2.11
RFX3P48380 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
RFX3P48380 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.87□□□□□ -2.11
RFX3P48380 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.87□□□□□ -2.11
RFX3P48380 AC103710.2-202ENST00000641454 2853 ntBASIC1.86□□□□□ -2.11
RFX3P48380 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
RFX3P48380 RNA5SP240-201ENST00000365355 128 ntBASIC1.86□□□□□ -2.11
RFX3P48380 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC127391.1-201ENST00000411737 98 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC016831.2-201ENST00000417179 352 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC009518.2-201ENST00000418056 731 ntBASIC1.86□□□□□ -2.11
RFX3P48380 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX3P48380 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX3P48380 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AL589872.1-201ENST00000426602 288 ntBASIC1.86□□□□□ -2.11
RFX3P48380 MED13P1-201ENST00000428342 171 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX3P48380 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX3P48380 RPS24P1-201ENST00000438550 371 ntBASIC1.86□□□□□ -2.11
RFX3P48380 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX3P48380 NDUFB1P2-201ENST00000449477 176 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX3P48380 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.86□□□□□ -2.11
RFX3P48380 Y_RNA.672-201ENST00000516289 104 ntBASIC1.86□□□□□ -2.11
RFX3P48380 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC106038.2-201ENST00000520706 568 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.86□□□□□ -2.11
RFX3P48380 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.86□□□□□ -2.11
RFX3P48380 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.86□□□□□ -2.11
RFX3P48380 OR11H5P-201ENST00000554039 926 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
RFX3P48380 AL022161.1-201ENST00000604390 213 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC092354.1-201ENST00000606057 376 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AL139286.2-201ENST00000606838 396 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AL451064.1-201ENST00000607718 471 ntBASIC1.86□□□□□ -2.11
RFX3P48380 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
RFX3P48380 AC098657.3-201ENST00000620434 263 ntBASIC1.86□□□□□ -2.11
RFX3P48380 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
RFX3P48380 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
RFX3P48380 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
RFX3P48380 MTND4P4-201ENST00000439033 1366 ntBASIC1.85□□□□□ -2.11
RFX3P48380 MIR412-201ENST00000362142 91 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RNU6-1159P-201ENST00000362933 107 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RNU1-23P-201ENST00000363361 144 ntBASIC1.85□□□□□ -2.11
RFX3P48380 SNORA25B-201ENST00000365507 128 ntBASIC1.85□□□□□ -2.11
RFX3P48380 MIR558-201ENST00000384920 94 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RPL23AP32-201ENST00000395315 459 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AL031577.2-201ENST00000404133 280 ntBASIC1.85□□□□□ -2.11
RFX3P48380 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX3P48380 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 ELOCP4-201ENST00000420090 333 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX3P48380 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX3P48380 MTND1P30-201ENST00000441241 901 ntBASIC1.85□□□□□ -2.11
RFX3P48380 UBE2D3P4-201ENST00000441973 436 ntBASIC1.85□□□□□ -2.11
RFX3P48380 EPS15P1-201ENST00000448836 336 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 RNA5SP233-201ENST00000459153 113 ntBASIC1.85□□□□□ -2.11
RFX3P48380 BZW1P2-201ENST00000473537 826 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RPL38P4-201ENST00000502376 214 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX3P48380 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 FABP5P5-201ENST00000515537 406 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RNA5SP137-201ENST00000516833 135 ntBASIC1.85□□□□□ -2.11
RFX3P48380 RNU6-232P-201ENST00000517144 64 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.85□□□□□ -2.11
RFX3P48380 RANP3-201ENST00000530970 276 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 OR5B19P-201ENST00000531766 928 ntBASIC1.85□□□□□ -2.11
RFX3P48380 ADI1P3-201ENST00000549509 470 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 RPL21P5-201ENST00000554662 472 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC008015.1-201ENST00000555505 465 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX3P48380 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX3P48380 AC096772.1-201ENST00000609146 564 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC122133.1-201ENST00000613964 233 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC108479.2-201ENST00000617314 601 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC024940.5-201ENST00000622889 474 ntBASIC1.85□□□□□ -2.11
RFX3P48380 AC099654.13-201ENST00000639774 207 ntBASIC1.85□□□□□ -2.11
RFX3P48380 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX3P48380 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RFX3P48380 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.11
RFX3P48380 SNORD114-1-201ENST00000362705 72 ntBASIC1.84□□□□□ -2.11
RFX3P48380 RNY1P12-201ENST00000364251 105 ntBASIC1.84□□□□□ -2.11
RFX3P48380 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
RFX3P48380 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
RFX3P48380 RNU6-1140P-201ENST00000410517 106 ntBASIC1.84□□□□□ -2.11
RFX3P48380 RNU2-39P-201ENST00000410604 198 ntBASIC1.84□□□□□ -2.11
RFX3P48380 EIF1AXP1-201ENST00000419267 435 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC008267.5-201ENST00000424928 265 ntBASIC1.84□□□□□ -2.11
RFX3P48380 MTND5P25-201ENST00000430499 799 ntBASIC1.84□□□□□ -2.11
RFX3P48380 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms