Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC004908.3-201ENST00000610248 625 ntBASIC0.02□□□□□ -2.41
HTTP42858 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.02□□□□□ -2.41
HTTP42858 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
HTTP42858 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HTTP42858 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
HTTP42858 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.02□□□□□ -2.41
HTTP42858 RNU6-945P-201ENST00000383947 107 ntBASIC0.02□□□□□ -2.41
HTTP42858 Y_RNA.410-201ENST00000383992 113 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNU2-63P-201ENST00000410792 194 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC006512.1-201ENST00000468816 291 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.02□□□□□ -2.41
HTTP42858 SNORA4.4-201ENST00000515921 135 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC004923.2-201ENST00000529649 369 ntBASIC0.02□□□□□ -2.41
HTTP42858 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.02□□□□□ -2.41
HTTP42858 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.02□□□□□ -2.41
HTTP42858 Z99571.1-201ENST00000636677 394 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNA5SP125-201ENST00000364843 120 ntBASIC0.01□□□□□ -2.41
HTTP42858 Y_RNA.568-201ENST00000384742 113 ntBASIC0.01□□□□□ -2.41
HTTP42858 RPS15AP38-201ENST00000413110 372 ntBASIC0.01□□□□□ -2.41
HTTP42858 RPL26P27-201ENST00000414397 437 ntBASIC0.01□□□□□ -2.41
HTTP42858 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.01□□□□□ -2.41
HTTP42858 MIR3937-201ENST00000580135 106 ntBASIC0.01□□□□□ -2.41
HTTP42858 RPL30P11-203ENST00000598995 310 ntBASIC0.01□□□□□ -2.41
HTTP42858 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
HTTP42858 AC068276.1-201ENST00000605793 379 ntBASIC0.01□□□□□ -2.41
HTTP42858 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.01□□□□□ -2.41
HTTP42858 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.01□□□□□ -2.41
HTTP42858 AC091965.5-201ENST00000624785 342 ntBASIC0.01□□□□□ -2.41
HTTP42858 RNU6-439P-201ENST00000384188 106 ntBASIC0.01□□□□□ -2.41
HTTP42858 MIR506-201ENST00000384998 124 ntBASIC0.01□□□□□ -2.41
HTTP42858 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.01□□□□□ -2.41
HTTP42858 MTND4LP21-201ENST00000415303 295 ntBASIC0.01□□□□□ -2.41
HTTP42858 PNRC2P1-201ENST00000423940 420 ntBASIC0.01□□□□□ -2.41
HTTP42858 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.01□□□□□ -2.41
HTTP42858 AC002350.1-201ENST00000490759 375 ntBASIC0.01□□□□□ -2.41
HTTP42858 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.01□□□□□ -2.41
HTTP42858 RNU6-943P-201ENST00000516960 98 ntBASIC0.01□□□□□ -2.41
HTTP42858 AC125611.1-201ENST00000549563 229 ntBASIC0.01□□□□□ -2.41
HTTP42858 MTCYBP27-201ENST00000555160 670 ntBASIC0.01□□□□□ -2.41
HTTP42858 AC009712.1-201ENST00000564938 316 ntBASIC0.01□□□□□ -2.41
HTTP42858 AP001330.4-201ENST00000604350 154 ntBASIC0.01□□□□□ -2.41
HTTP42858 RNU6-1335P-201ENST00000365426 107 ntBASIC0□□□□□ -2.41
HTTP42858 RNA5SP451-201ENST00000410588 110 ntBASIC0□□□□□ -2.41
HTTP42858 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0□□□□□ -2.41
HTTP42858 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0□□□□□ -2.41
HTTP42858 BET1P1-201ENST00000482276 359 ntBASIC0□□□□□ -2.41
HTTP42858 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0□□□□□ -2.41
HTTP42858 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0□□□□□ -2.41
HTTP42858 RNA5SP168-201ENST00000516642 112 ntBASIC0□□□□□ -2.41
HTTP42858 AC092470.1-201ENST00000546187 132 ntBASIC0□□□□□ -2.41
HTTP42858 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0□□□□□ -2.41
HTTP42858 MIR365A-201ENST00000362260 87 ntBASIC0□□□□□ -2.41
HTTP42858 RNU6-46P-201ENST00000383860 107 ntBASIC0□□□□□ -2.41
HTTP42858 RNU6-532P-201ENST00000384318 107 ntBASIC0□□□□□ -2.41
HTTP42858 MIR518D-201ENST00000385014 87 ntBASIC0□□□□□ -2.41
HTTP42858 BTF3P11-201ENST00000426582 477 ntBASIC0□□□□□ -2.41
HTTP42858 RPS15AP5-201ENST00000436276 388 ntBASIC0□□□□□ -2.41
HTTP42858 AC245102.2-201ENST00000448956 180 ntBASIC0□□□□□ -2.41
HTTP42858 UBE2Q2P9-201ENST00000490086 202 ntBASIC0□□□□□ -2.41
HTTP42858 TRBVA-201ENST00000498804 316 ntBASIC0□□□□□ -2.41
HTTP42858 AC022493.2-201ENST00000506122 481 ntBASIC0□□□□□ -2.41
HTTP42858 SNORA31.6-201ENST00000516241 130 ntBASIC0□□□□□ -2.41
HTTP42858 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0□□□□□ -2.41
HTTP42858 AC090888.1-201ENST00000561335 1141 ntBASIC0□□□□□ -2.41
HTTP42858 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0□□□□□ -2.41
HTTP42858 AP002826.1-201ENST00000608835 315 ntBASIC0□□□□□ -2.41
HTTP42858 AC055764.2-201ENST00000610089 670 ntBASIC0□□□□□ -2.41
HTTP42858 AC073349.3-201ENST00000617616 186 ntBASIC0□□□□□ -2.41
HTTP42858 AL391597.1-201ENST00000618707 694 ntBASIC0□□□□□ -2.41
HTTP42858 MIR5739-201ENST00000619803 80 ntBASIC0□□□□□ -2.41
HTTP42858 MIR635-201ENST00000384830 98 ntBASIC-0□□□□□ -2.41
HTTP42858 MIR320B1-201ENST00000390209 79 ntBASIC-0□□□□□ -2.41
HTTP42858 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0□□□□□ -2.41
HTTP42858 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0□□□□□ -2.41
HTTP42858 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0□□□□□ -2.41
HTTP42858 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0□□□□□ -2.41
HTTP42858 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0□□□□□ -2.41
HTTP42858 RN7SKP88-201ENST00000516847 250 ntBASIC-0□□□□□ -2.41
HTTP42858 7SK.8-201ENST00000612110 250 ntBASIC-0□□□□□ -2.41
HTTP42858 7SK.11-201ENST00000615477 250 ntBASIC-0□□□□□ -2.41
HTTP42858 7SK.13-201ENST00000622040 250 ntBASIC-0□□□□□ -2.41
HTTP42858 AC027309.3-201ENST00000623419 351 ntBASIC-0□□□□□ -2.41
HTTP42858 RNU2-21P-201ENST00000410368 188 ntBASIC-0.01□□□□□ -2.41
HTTP42858 RNU2-7P-201ENST00000410794 178 ntBASIC-0.01□□□□□ -2.41
HTTP42858 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.01□□□□□ -2.41
HTTP42858 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
HTTP42858 RNU6-420P-201ENST00000458780 107 ntBASIC-0.01□□□□□ -2.41
HTTP42858 snoU13.7-201ENST00000459220 104 ntBASIC-0.01□□□□□ -2.41
HTTP42858 HMGB1P35-201ENST00000503360 598 ntBASIC-0.01□□□□□ -2.41
HTTP42858 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.01□□□□□ -2.41
HTTP42858 SNORA76.2-201ENST00000517095 137 ntBASIC-0.01□□□□□ -2.41
HTTP42858 SNORA70.22-201ENST00000517160 124 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AC107953.1-201ENST00000522216 297 ntBASIC-0.01□□□□□ -2.41
HTTP42858 MIR103A1-201ENST00000362165 78 ntBASIC-0.01□□□□□ -2.41
HTTP42858 MIR608-201ENST00000384820 100 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AL160275.3-201ENST00000423876 471 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AL669831.1-202ENST00000428504 417 ntBASIC-0.01□□□□□ -2.41
HTTP42858 TPMTP4-201ENST00000450749 678 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms