Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCNFP41002 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 RNU1-73P-201ENST00000383971 164 ntBASIC4.09□□□□□ -1.75
CCNFP41002 SNORA1.3-201ENST00000384676 136 ntBASIC4.09□□□□□ -1.75
CCNFP41002 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCNFP41002 RPL21P17-201ENST00000397467 475 ntBASIC4.09□□□□□ -1.75
CCNFP41002 RNU6-130P-201ENST00000411112 103 ntBASIC4.09□□□□□ -1.75
CCNFP41002 RNU6-1245P-201ENST00000411130 106 ntBASIC4.09□□□□□ -1.75
CCNFP41002 RPL21P38-201ENST00000418090 167 ntBASIC4.09□□□□□ -1.75
CCNFP41002 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 RPL21P40-201ENST00000428586 483 ntBASIC4.09□□□□□ -1.75
CCNFP41002 Z82188.1-201ENST00000436709 154 ntBASIC4.09□□□□□ -1.75
CCNFP41002 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.09□□□□□ -1.75
CCNFP41002 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.09□□□□□ -1.75
CCNFP41002 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.09□□□□□ -1.75
CCNFP41002 RNA5SP310-201ENST00000459084 116 ntBASIC4.09□□□□□ -1.75
CCNFP41002 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.09□□□□□ -1.75
CCNFP41002 SNRPGP7-201ENST00000469016 106 ntBASIC4.09□□□□□ -1.75
CCNFP41002 AC010265.1-201ENST00000513509 211 ntBASIC4.09□□□□□ -1.75
CCNFP41002 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.09□□□□□ -1.75
CCNFP41002 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
CCNFP41002 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.09□□□□□ -1.75
CCNFP41002 AC104581.2-201ENST00000572227 430 ntBASIC4.09□□□□□ -1.75
CCNFP41002 AC060766.3-201ENST00000591442 263 ntBASIC4.09□□□□□ -1.75
CCNFP41002 RPL23AP78-201ENST00000599928 470 ntBASIC4.09□□□□□ -1.75
CCNFP41002 AL355877.2-201ENST00000603670 358 ntBASIC4.09□□□□□ -1.75
CCNFP41002 MIR8059-201ENST00000620427 81 ntBASIC4.09□□□□□ -1.75
CCNFP41002 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCNFP41002 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CCNFP41002 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCNFP41002 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.08□□□□□ -1.76
CCNFP41002 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 Y_RNA.14-201ENST00000362415 103 ntBASIC4.08□□□□□ -1.76
CCNFP41002 RNU6-858P-201ENST00000362436 107 ntBASIC4.08□□□□□ -1.76
CCNFP41002 Y_RNA.60-201ENST00000362831 98 ntBASIC4.08□□□□□ -1.76
CCNFP41002 Y_RNA.105-201ENST00000363182 111 ntBASIC4.08□□□□□ -1.76
CCNFP41002 Y_RNA.183-201ENST00000363882 113 ntBASIC4.08□□□□□ -1.76
CCNFP41002 RNU6-968P-201ENST00000384076 107 ntBASIC4.08□□□□□ -1.76
CCNFP41002 SNORD116-20-201ENST00000384529 92 ntBASIC4.08□□□□□ -1.76
CCNFP41002 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCNFP41002 AP000275.1-201ENST00000411943 390 ntBASIC4.08□□□□□ -1.76
CCNFP41002 COX6B1P7-201ENST00000430845 235 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
CCNFP41002 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 RPL23AP22-201ENST00000437556 453 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AL353705.4-201ENST00000449661 238 ntBASIC4.08□□□□□ -1.76
CCNFP41002 HMGB3P8-201ENST00000449709 577 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AL513124.1-201ENST00000450410 614 ntBASIC4.08□□□□□ -1.76
CCNFP41002 MTATP6P7-201ENST00000453315 681 ntBASIC4.08□□□□□ -1.76
CCNFP41002 RPL39P38-201ENST00000467018 153 ntBASIC4.08□□□□□ -1.76
CCNFP41002 TRBVB-201ENST00000477100 408 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AC105137.1-201ENST00000484355 562 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AP003730.1-201ENST00000524605 285 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNFP41002 AC022655.2-201ENST00000577280 318 ntBASIC4.08□□□□□ -1.76
CCNFP41002 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
CCNFP41002 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNFP41002 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCNFP41002 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
CCNFP41002 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
CCNFP41002 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNFP41002 Z82217.1-201ENST00000625157 8149 ntBASIC4.08□□□□□ -1.76
CCNFP41002 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
CCNFP41002 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 AC007656.2-201ENST00000624902 4547 ntBASIC4.07□□□□□ -1.76
CCNFP41002 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
CCNFP41002 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCNFP41002 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCNFP41002 Y_RNA.27-201ENST00000362540 103 ntBASIC4.07□□□□□ -1.76
CCNFP41002 SNORA20.1-201ENST00000364790 130 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RNU6-1035P-201ENST00000384477 107 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL21P75-201ENST00000396599 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL21P28-201ENST00000401418 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL26P27-201ENST00000414397 437 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AL590556.1-201ENST00000423231 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNFP41002 AC091286.1-201ENST00000431233 461 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL21P11-201ENST00000461458 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL21P39-201ENST00000463605 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC098869.1-201ENST00000481627 292 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC087190.1-201ENST00000484462 480 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC107032.1-201ENST00000485945 480 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC132942.1-201ENST00000486753 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC093591.1-201ENST00000491435 481 ntBASIC4.07□□□□□ -1.76
CCNFP41002 RPL21P16-201ENST00000495531 483 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC010469.2-201ENST00000496412 480 ntBASIC4.07□□□□□ -1.76
CCNFP41002 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.07□□□□□ -1.76
CCNFP41002 BTF3L4P4-201ENST00000506381 449 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms