Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HMGCLP35914 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
HMGCLP35914 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HMGCLP35914 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCLP35914 MIR449A-201ENST00000362113 91 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 Y_RNA.3-201ENST00000362331 103 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 SNORA62.1-201ENST00000364287 154 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 RNU6-1029P-201ENST00000384109 107 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 RNU6-166P-201ENST00000384371 107 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 CALM2P3-201ENST00000400429 449 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AL591416.1-201ENST00000404015 867 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC009414.1-201ENST00000427200 443 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGCLP35914 GTF2IP20-201ENST00000431663 360 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 RPS15AP28-201ENST00000435088 386 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 MTND1P34-201ENST00000438556 671 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AL360271.2-201ENST00000447710 161 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 HMGN2P10-201ENST00000448085 265 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 FDX1P2-201ENST00000450769 375 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCLP35914 RPL37P6-201ENST00000460682 294 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC083798.1-201ENST00000472671 131 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 RPS29P20-201ENST00000489592 171 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC079382.1-201ENST00000493346 557 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 NACAP3-201ENST00000552100 481 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 MIR4424-201ENST00000585257 86 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC008752.3-201ENST00000588113 712 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCLP35914 Z84480.1-201ENST00000605131 311 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGCLP35914 MIR6134-201ENST00000617606 109 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCLP35914 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGCLP35914 AL512643.1-201ENST00000635735 524 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HMGCLP35914 AC006020.1-201ENST00000420179 1854 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 CDC27P3-201ENST00000635418 1910 ntBASIC2.3□□□□□ -2.04
HMGCLP35914 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 Y_RNA.33-201ENST00000362591 102 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 XGY1-201ENST00000381172 446 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 Y_RNA.505-201ENST00000384489 102 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 MIR767-201ENST00000390228 109 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU6-903P-201ENST00000391270 109 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 CISD1P1-201ENST00000393907 327 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC068050.1-201ENST00000394891 380 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU2-29P-201ENST00000410423 189 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU4-46P-201ENST00000410818 138 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGCLP35914 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCLP35914 AL358075.3-201ENST00000426289 226 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AL669831.1-202ENST00000428504 417 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 GTF2IP13-201ENST00000438487 386 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC104058.1-201ENST00000448028 297 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCLP35914 AC073415.1-201ENST00000449240 153 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCLP35914 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RPL26P9-201ENST00000457466 433 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AL162395.1-201ENST00000457882 422 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 SNORA59A-201ENST00000459326 152 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC107626.1-201ENST00000471084 183 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCLP35914 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCLP35914 EIF4EP3-201ENST00000498782 656 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 MTCO3P9-201ENST00000506989 781 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC104806.1-201ENST00000508720 308 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU6-143P-201ENST00000516942 93 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU6-835P-201ENST00000516974 104 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RNU6-1183P-201ENST00000517054 60 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC025755.1-201ENST00000521306 278 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 RANP3-201ENST00000530970 276 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 OR5AL2P-201ENST00000532185 920 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCLP35914 TPRKBP2-201ENST00000565969 475 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGCLP35914 AC004223.2-201ENST00000590309 544 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AL138889.2-201ENST00000603883 242 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCLP35914 AC126118.1-201ENST00000607744 628 ntBASIC2.29□□□□□ -2.04
HMGCLP35914 AC122108.2-201ENST00000611946 526 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms