Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 Y_RNA.142-201ENST00000363491 102 ntBASIC3.08□□□□□ -1.92
RFC1P35251 Y_RNA.184-201ENST00000363884 108 ntBASIC3.08□□□□□ -1.92
RFC1P35251 Y_RNA.263-201ENST00000364659 114 ntBASIC3.08□□□□□ -1.92
RFC1P35251 Y_RNA.301-201ENST00000364990 103 ntBASIC3.08□□□□□ -1.92
RFC1P35251 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
RFC1P35251 RNU6-1179P-201ENST00000384667 107 ntBASIC3.08□□□□□ -1.92
RFC1P35251 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RFC1P35251 EIF4E2P1-201ENST00000393781 255 ntBASIC3.08□□□□□ -1.92
RFC1P35251 RN7SKP32-201ENST00000410167 303 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.08□□□□□ -1.92
RFC1P35251 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AL714022.1-201ENST00000439897 151 ntBASIC3.08□□□□□ -1.92
RFC1P35251 MRPL50P4-201ENST00000446432 475 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.08□□□□□ -1.92
RFC1P35251 MTND1P11-201ENST00000456661 876 ntBASIC3.08□□□□□ -1.92
RFC1P35251 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
RFC1P35251 RPL27AP5-201ENST00000469428 449 ntBASIC3.08□□□□□ -1.92
RFC1P35251 RNU6-864P-201ENST00000516256 108 ntBASIC3.08□□□□□ -1.92
RFC1P35251 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.08□□□□□ -1.92
RFC1P35251 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.08□□□□□ -1.92
RFC1P35251 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFC1P35251 AP002404.1-201ENST00000532005 451 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
RFC1P35251 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.08□□□□□ -1.92
RFC1P35251 FGF7P1-201ENST00000582820 288 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.08□□□□□ -1.92
RFC1P35251 MIR5692C1-201ENST00000585309 91 ntBASIC3.08□□□□□ -1.92
RFC1P35251 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.08□□□□□ -1.92
RFC1P35251 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.08□□□□□ -1.92
RFC1P35251 AL031601.2-202ENST00000622650 282 ntBASIC3.08□□□□□ -1.92
RFC1P35251 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RFC1P35251 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFC1P35251 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
RFC1P35251 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
RFC1P35251 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RFC1P35251 SNORA40C-201ENST00000391285 128 ntBASIC3.07□□□□□ -1.92
RFC1P35251 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AL122016.1-201ENST00000403365 367 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.07□□□□□ -1.92
RFC1P35251 AC099548.1-201ENST00000421443 426 ntBASIC3.07□□□□□ -1.92
RFC1P35251 SKA2P1-201ENST00000425592 390 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.07□□□□□ -1.92
RFC1P35251 NDUFA5P4-201ENST00000436704 385 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.07□□□□□ -1.92
RFC1P35251 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.07□□□□□ -1.92
RFC1P35251 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.07□□□□□ -1.92
RFC1P35251 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC103851.1-201ENST00000506833 274 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC008549.1-201ENST00000512900 643 ntBASIC3.07□□□□□ -1.92
RFC1P35251 RNU6-1088P-201ENST00000516850 104 ntBASIC3.07□□□□□ -1.92
RFC1P35251 RNU6-703P-201ENST00000516946 107 ntBASIC3.07□□□□□ -1.92
RFC1P35251 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AP000763.2-201ENST00000540641 163 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
RFC1P35251 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
RFC1P35251 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.07□□□□□ -1.92
RFC1P35251 MIR3672-201ENST00000584290 82 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AL670379.10-201ENST00000604330 253 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AL670379.9-201ENST00000605428 253 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC093913.1-201ENST00000614178 329 ntBASIC3.07□□□□□ -1.92
RFC1P35251 RMST_4.1-201ENST00000616886 107 ntBASIC3.07□□□□□ -1.92
RFC1P35251 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
RFC1P35251 AC002064.3-201ENST00000623448 346 ntBASIC3.07□□□□□ -1.92
RFC1P35251 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFC1P35251 RNU6-266P-201ENST00000364225 107 ntBASIC3.06□□□□□ -1.92
RFC1P35251 RNA5SP387-201ENST00000364226 106 ntBASIC3.06□□□□□ -1.92
RFC1P35251 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFC1P35251 RNU6-166P-201ENST00000384371 107 ntBASIC3.06□□□□□ -1.92
RFC1P35251 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
RFC1P35251 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.06□□□□□ -1.92
RFC1P35251 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.06□□□□□ -1.92
RFC1P35251 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.06□□□□□ -1.92
RFC1P35251 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.06□□□□□ -1.92
RFC1P35251 RPS3AP12-201ENST00000443616 753 ntBASIC3.06□□□□□ -1.92
RFC1P35251 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AC092001.1-201ENST00000453012 261 ntBASIC3.06□□□□□ -1.92
RFC1P35251 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
RFC1P35251 AMD1P1-201ENST00000457220 922 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AC011005.2-201ENST00000487324 359 ntBASIC3.06□□□□□ -1.92
RFC1P35251 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.06□□□□□ -1.92
RFC1P35251 RPS27P26-201ENST00000494583 239 ntBASIC3.06□□□□□ -1.92
RFC1P35251 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFC1P35251 SNORA31.19-201ENST00000517079 126 ntBASIC3.06□□□□□ -1.92
RFC1P35251 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFC1P35251 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.06□□□□□ -1.92
RFC1P35251 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.06□□□□□ -1.92
RFC1P35251 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
RFC1P35251 RPS3AP23-202ENST00000574601 686 ntBASIC3.06□□□□□ -1.92
RFC1P35251 MIR4325-201ENST00000583049 90 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AC078899.3-201ENST00000599065 212 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AC010620.2-201ENST00000600135 313 ntBASIC3.06□□□□□ -1.92
RFC1P35251 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.06□□□□□ -1.92
RFC1P35251 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFC1P35251 ATP5A1P2-202ENST00000616464 443 ntBASIC3.06□□□□□ -1.92
RFC1P35251 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
RFC1P35251 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.06□□□□□ -1.92
RFC1P35251 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms