Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-5P-201ENST00000384238 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-3P-201ENST00000384314 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-16P-201ENST00000384385 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-15P-201ENST00000384534 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-2-201ENST00000384627 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-29P-201ENST00000384637 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-9-201ENST00000384776 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-33P-201ENST00000384793 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A4P31645 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A4P31645 SNORD56-201ENST00000413522 71 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RPL26P27-201ENST00000414397 437 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A4P31645 AC002075.2-201ENST00000425207 252 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AC005326.1-201ENST00000429197 123 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AL035666.1-201ENST00000446195 348 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 HMGN2P16-201ENST00000456802 261 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 CEACAMP4-201ENST00000457676 421 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RPL7P42-201ENST00000481005 679 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-703P-201ENST00000516946 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 CASP1P1-201ENST00000526345 212 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 HMGB1P14-201ENST00000557424 591 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 MIR4782-201ENST00000577987 79 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AC016925.2-201ENST00000605108 242 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AC018889.1-201ENST00000605372 397 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 RNU6-6P-201ENST00000606623 107 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A4P31645 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.5□□□□□ -1.85
SLC6A4P31645 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A4P31645 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC6A4P31645 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A4P31645 AC002546.1-201ENST00000588041 2504 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A4P31645 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A4P31645 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
SLC6A4P31645 FTLP6-201ENST00000355274 422 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 Y_RNA.2-201ENST00000362330 96 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 RNU6-490P-201ENST00000362985 107 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 Y_RNA.252-201ENST00000364556 101 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 Y_RNA.404-201ENST00000383978 102 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 RNU6-790P-201ENST00000384479 105 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 SNORA41-201ENST00000384675 132 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SLC6A4P31645 PGBD4P6-201ENST00000421501 610 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 PMCHL1-202ENST00000423102 261 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AL133396.1-201ENST00000432048 687 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC092573.2-201ENST00000434546 243 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A4P31645 RPL37P4-201ENST00000448908 268 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A4P31645 AC006026.2-201ENST00000457376 180 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 U8.21-201ENST00000459536 136 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AL135752.1-201ENST00000479477 471 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A4P31645 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A4P31645 AC114801.2-201ENST00000503825 781 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.49□□□□□ -1.85
SLC6A4P31645 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A4P31645 ACA59.1-201ENST00000515966 143 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.49□□□□□ -1.85
SLC6A4P31645 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A4P31645 AC006557.5-201ENST00000603126 811 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC040896.1-201ENST00000613819 479 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 AC092608.2-201ENST00000624427 218 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 SCARNA15.3-201ENST00000626315 122 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 SCARNA4.1-201ENST00000628597 123 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 MIR3651-201ENST00000630427 90 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 U6.99-201ENST00000637524 83 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A4P31645 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
SLC6A4P31645 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SLC6A4P31645 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A4P31645 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A4P31645 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 Y_RNA.145-201ENST00000363527 102 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 SNORA22B-201ENST00000383876 138 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 MIR888-201ENST00000401186 77 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 YPEL5P1-201ENST00000419731 367 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AL159169.1-201ENST00000421119 127 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC018865.2-201ENST00000423631 129 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A4P31645 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A4P31645 AL031274.1-201ENST00000450334 232 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A4P31645 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 MIR2053-201ENST00000459295 91 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC008571.1-201ENST00000467232 300 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 RPL23AP45-201ENST00000476406 468 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 AC113155.1-201ENST00000511141 769 ntBASIC3.48□□□□□ -1.85
SLC6A4P31645 RNU6-470P-201ENST00000515954 104 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms