Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR2AP24928 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
POLR2AP24928 AC007496.3-201ENST00000624987 3443 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
POLR2AP24928 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.54□□□□□ -1.84
POLR2AP24928 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR2AP24928 RNU6-266P-201ENST00000364225 107 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 RNU6-823P-201ENST00000391042 103 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 MIR1261-201ENST00000408659 82 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR2AP24928 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR2AP24928 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR2AP24928 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR2AP24928 AL359672.1-201ENST00000442302 409 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 RPS23P3-201ENST00000470993 430 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 AC104576.1-201ENST00000524225 88 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 SNRPGP16-201ENST00000533275 226 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 LRRC37A5P-203ENST00000580181 585 ntBASIC3.54□□□□□ -1.84
POLR2AP24928 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR2AP24928 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR2AP24928 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 AC092435.3-201ENST00000565538 3654 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 Y_RNA.39-201ENST00000362620 98 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 RNU6-190P-201ENST00000384154 102 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 CECR9-201ENST00000453421 199 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 MRPS35P2-201ENST00000508242 191 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 AF186190.1-201ENST00000517470 480 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 AL157871.3-201ENST00000557231 293 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 RPL23AP84-201ENST00000571193 464 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 MIR5692A1-201ENST00000580523 69 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.53□□□□□ -1.84
POLR2AP24928 AC078899.3-201ENST00000599065 212 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 HMGB1P50-201ENST00000605814 607 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 HMGB1P24-202ENST00000615653 685 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 AC244205.2-202ENST00000635781 342 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 MTND5P27-201ENST00000428871 1720 ntBASIC3.53□□□□□ -1.84
POLR2AP24928 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR2AP24928 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR2AP24928 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-173P-201ENST00000364215 104 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-1317P-201ENST00000364582 104 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 Y_RNA.424-201ENST00000384063 103 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 MIR625-201ENST00000385047 85 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 SNORA16.2-201ENST00000390991 127 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-712P-201ENST00000410558 100 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU2-64P-201ENST00000411315 191 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 USP9YP30-201ENST00000430729 455 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 DAP3P1-201ENST00000441522 278 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AC073910.1-201ENST00000445047 438 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RPL12P25-201ENST00000455592 494 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR2AP24928 OR4H12P-201ENST00000556269 907 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AC027176.1-201ENST00000560204 514 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR2AP24928 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR2AP24928 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AP001005.3-201ENST00000622049 129 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
POLR2AP24928 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR2AP24928 ASNSP1-201ENST00000518311 1939 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 Y_RNA.324-201ENST00000365165 102 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 Y_RNA.364-201ENST00000365532 101 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 DEFB109C-201ENST00000382575 264 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 DEFB109B-201ENST00000382656 264 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-209P-201ENST00000384118 107 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNY1P14-201ENST00000384426 108 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RNU6-328P-201ENST00000390887 106 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AL445529.1-201ENST00000398713 389 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RPL21P1-201ENST00000399532 476 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 RPL21P38-201ENST00000418090 167 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 TOMM20P4-201ENST00000427861 435 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
POLR2AP24928 AP002884.2-201ENST00000471647 395 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AC010631.1-201ENST00000474150 156 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 SNORA25.11-201ENST00000515935 105 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 AC018889.1-201ENST00000605372 397 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 HSPA8P1-201ENST00000425843 1833 ntBASIC3.52□□□□□ -1.85
POLR2AP24928 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR2AP24928 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
POLR2AP24928 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
POLR2AP24928 RNA5SP322-201ENST00000363617 119 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 MIR9-1-201ENST00000385198 89 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 AL591034.2-201ENST00000402839 359 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 HMGB1P27-201ENST00000431429 603 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RPS15AP10-201ENST00000432472 382 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms