Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SETP5-201ENST00000437270 562 ntBASIC4.55□□□□□ -1.68
LIG1P18858 FABP5P15-201ENST00000453566 214 ntBASIC4.55□□□□□ -1.68
LIG1P18858 snoU13.24-201ENST00000458998 104 ntBASIC4.55□□□□□ -1.68
LIG1P18858 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.55□□□□□ -1.68
LIG1P18858 RPL7P5-201ENST00000471472 736 ntBASIC4.55□□□□□ -1.68
LIG1P18858 RPL21P13-201ENST00000488305 481 ntBASIC4.55□□□□□ -1.68
LIG1P18858 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.55□□□□□ -1.68
LIG1P18858 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.55□□□□□ -1.68
LIG1P18858 AC025627.2-201ENST00000576220 160 ntBASIC4.55□□□□□ -1.68
LIG1P18858 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.55□□□□□ -1.68
LIG1P18858 AC006557.5-201ENST00000603126 811 ntBASIC4.55□□□□□ -1.68
LIG1P18858 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.55□□□□□ -1.68
LIG1P18858 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.55□□□□□ -1.68
LIG1P18858 FTX_2.1-201ENST00000618816 94 ntBASIC4.55□□□□□ -1.68
LIG1P18858 AL360181.4-201ENST00000621752 134 ntBASIC4.55□□□□□ -1.68
LIG1P18858 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LIG1P18858 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.54□□□□□ -1.68
LIG1P18858 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 DEFB108F-201ENST00000344638 222 ntBASIC4.54□□□□□ -1.68
LIG1P18858 SNORD27-201ENST00000363981 72 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RNU6-173P-201ENST00000364215 104 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RNY1-201ENST00000364228 113 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RNA5SP283-201ENST00000365604 119 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RNU2-14P-201ENST00000411053 191 ntBASIC4.54□□□□□ -1.68
LIG1P18858 AC091390.3-201ENST00000426478 338 ntBASIC4.54□□□□□ -1.68
LIG1P18858 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.54□□□□□ -1.68
LIG1P18858 HIGD1AP2-201ENST00000446367 280 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RN7SKP210-201ENST00000459176 261 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RPL23AP45-201ENST00000476406 468 ntBASIC4.54□□□□□ -1.68
LIG1P18858 RN7SKP21-201ENST00000516503 220 ntBASIC4.54□□□□□ -1.68
LIG1P18858 AC109479.2-201ENST00000517842 174 ntBASIC4.54□□□□□ -1.68
LIG1P18858 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.54□□□□□ -1.68
LIG1P18858 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.54□□□□□ -1.68
LIG1P18858 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LIG1P18858 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.54□□□□□ -1.68
LIG1P18858 MIR492-201ENST00000638676 116 ntBASIC4.54□□□□□ -1.68
LIG1P18858 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.54□□□□□ -1.68
LIG1P18858 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIG1P18858 AC091152.2-201ENST00000591628 2569 ntBASIC4.54□□□□□ -1.68
LIG1P18858 OR4G2P-202ENST00000641004 1759 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AL391987.6-201ENST00000305671 199 ntBASIC4.53□□□□□ -1.68
LIG1P18858 SNORD14B-201ENST00000364533 90 ntBASIC4.53□□□□□ -1.68
LIG1P18858 RNA5SP515-201ENST00000364570 118 ntBASIC4.53□□□□□ -1.68
LIG1P18858 U3.13-201ENST00000364804 214 ntBASIC4.53□□□□□ -1.68
LIG1P18858 Y_RNA.352-201ENST00000365439 102 ntBASIC4.53□□□□□ -1.68
LIG1P18858 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
LIG1P18858 Y_RNA.462-201ENST00000384268 102 ntBASIC4.53□□□□□ -1.68
LIG1P18858 SNORD115-46-201ENST00000390982 71 ntBASIC4.53□□□□□ -1.68
LIG1P18858 HMGN2P8-201ENST00000391458 268 ntBASIC4.53□□□□□ -1.68
LIG1P18858 RNU2-33P-201ENST00000410344 192 ntBASIC4.53□□□□□ -1.68
LIG1P18858 HSPE1P12-201ENST00000412576 301 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AL356095.1-201ENST00000417217 199 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.53□□□□□ -1.68
LIG1P18858 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 AL117339.2-201ENST00000430475 180 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AL392103.1-201ENST00000447000 198 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC013470.1-201ENST00000453438 462 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC079354.2-201ENST00000453523 154 ntBASIC4.53□□□□□ -1.68
LIG1P18858 PRELID3BP1-201ENST00000457142 540 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AL049874.1-201ENST00000489560 388 ntBASIC4.53□□□□□ -1.68
LIG1P18858 RPS23P5-201ENST00000495419 428 ntBASIC4.53□□□□□ -1.68
LIG1P18858 HMGB1P22-201ENST00000505315 124 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.53□□□□□ -1.68
LIG1P18858 Y_RNA.713-201ENST00000517013 96 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.53□□□□□ -1.68
LIG1P18858 AL590705.4-201ENST00000532209 134 ntBASIC4.53□□□□□ -1.68
LIG1P18858 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.53□□□□□ -1.68
LIG1P18858 AC130289.1-201ENST00000577321 73 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 AC073410.2-201ENST00000603240 332 ntBASIC4.53□□□□□ -1.68
LIG1P18858 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
LIG1P18858 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 NCAPGP1-201ENST00000505112 1814 ntBASIC4.53□□□□□ -1.68
LIG1P18858 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.53□□□□□ -1.68
LIG1P18858 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
LIG1P18858 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIG1P18858 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LIG1P18858 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.52□□□□□ -1.69
LIG1P18858 Y_RNA.29-201ENST00000362570 113 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RNU1-35P-201ENST00000362782 153 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RNU1-18P-201ENST00000363062 164 ntBASIC4.52□□□□□ -1.69
LIG1P18858 Y_RNA.237-201ENST00000364439 102 ntBASIC4.52□□□□□ -1.69
LIG1P18858 MIR591-201ENST00000385290 95 ntBASIC4.52□□□□□ -1.69
LIG1P18858 Y_RNA.623-201ENST00000411128 95 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.52□□□□□ -1.69
LIG1P18858 AC079780.1-201ENST00000428259 207 ntBASIC4.52□□□□□ -1.69
LIG1P18858 MTND3P9-201ENST00000429526 346 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AL627311.1-201ENST00000431514 115 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
LIG1P18858 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RNU7-170P-201ENST00000459303 61 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms