Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
ATF4P18848 BTF3L4P4-201ENST00000506381 449 ntBASIC3.82□□□□□ -1.8
ATF4P18848 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.82□□□□□ -1.8
ATF4P18848 RNU6-1114P-201ENST00000516022 107 ntBASIC3.82□□□□□ -1.8
ATF4P18848 RNU5F-2P-201ENST00000516066 82 ntBASIC3.82□□□□□ -1.8
ATF4P18848 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
ATF4P18848 SNORA31.16-201ENST00000516773 139 ntBASIC3.82□□□□□ -1.8
ATF4P18848 RNA5SP54-201ENST00000516951 92 ntBASIC3.82□□□□□ -1.8
ATF4P18848 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.82□□□□□ -1.8
ATF4P18848 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATF4P18848 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.82□□□□□ -1.8
ATF4P18848 HSPE1P20-201ENST00000538133 289 ntBASIC3.82□□□□□ -1.8
ATF4P18848 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATF4P18848 TVP23BP1-201ENST00000557500 617 ntBASIC3.82□□□□□ -1.8
ATF4P18848 CYP4A27P-201ENST00000567218 190 ntBASIC3.82□□□□□ -1.8
ATF4P18848 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.82□□□□□ -1.8
ATF4P18848 MIR4765-201ENST00000585007 77 ntBASIC3.82□□□□□ -1.8
ATF4P18848 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
ATF4P18848 KLKP1-201ENST00000595979 403 ntBASIC3.82□□□□□ -1.8
ATF4P18848 AL137843.1-201ENST00000605078 385 ntBASIC3.82□□□□□ -1.8
ATF4P18848 RNU1-30P-201ENST00000606575 163 ntBASIC3.82□□□□□ -1.8
ATF4P18848 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
ATF4P18848 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATF4P18848 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATF4P18848 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATF4P18848 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.81□□□□□ -1.8
ATF4P18848 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
ATF4P18848 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.81□□□□□ -1.8
ATF4P18848 AL590240.1-201ENST00000334118 313 ntBASIC3.81□□□□□ -1.8
ATF4P18848 OR56A5-201ENST00000340110 738 ntBASIC3.81□□□□□ -1.8
ATF4P18848 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATF4P18848 RNU6-655P-201ENST00000362858 107 ntBASIC3.81□□□□□ -1.8
ATF4P18848 RNA5SP307-201ENST00000362863 116 ntBASIC3.81□□□□□ -1.8
ATF4P18848 RNU5F-3P-201ENST00000363767 117 ntBASIC3.81□□□□□ -1.8
ATF4P18848 Y_RNA.574-201ENST00000384766 95 ntBASIC3.81□□□□□ -1.8
ATF4P18848 MIR186-201ENST00000384988 86 ntBASIC3.81□□□□□ -1.8
ATF4P18848 SNORA77-201ENST00000408716 125 ntBASIC3.81□□□□□ -1.8
ATF4P18848 RPS26P42-201ENST00000413485 326 ntBASIC3.81□□□□□ -1.8
ATF4P18848 RPL23AP22-201ENST00000437556 453 ntBASIC3.81□□□□□ -1.8
ATF4P18848 snoU13.6-201ENST00000458785 104 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AC097484.1-201ENST00000471148 389 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AP000870.1-201ENST00000472927 406 ntBASIC3.81□□□□□ -1.8
ATF4P18848 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AC008953.1-201ENST00000497334 318 ntBASIC3.81□□□□□ -1.8
ATF4P18848 SLC25A15P5-201ENST00000508033 253 ntBASIC3.81□□□□□ -1.8
ATF4P18848 SNORA40.15-201ENST00000516884 107 ntBASIC3.81□□□□□ -1.8
ATF4P18848 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATF4P18848 AP002770.2-201ENST00000543613 532 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AC079598.5-201ENST00000547460 117 ntBASIC3.81□□□□□ -1.8
ATF4P18848 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATF4P18848 RPL7P50-201ENST00000600588 727 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AL034555.1-201ENST00000604816 211 ntBASIC3.81□□□□□ -1.8
ATF4P18848 AC087783.2-201ENST00000605070 562 ntBASIC3.81□□□□□ -1.8
ATF4P18848 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.81□□□□□ -1.8
ATF4P18848 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.81□□□□□ -1.8
ATF4P18848 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATF4P18848 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ATF4P18848 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 MFSD8-216ENST00000641147 4009 ntBASIC3.8□□□□□ -1.8
ATF4P18848 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 RNU6-222P-201ENST00000362438 107 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RNU6-238P-201ENST00000363313 106 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RNU1-106P-201ENST00000384382 164 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RNY3P4-201ENST00000384428 101 ntBASIC3.8□□□□□ -1.8
ATF4P18848 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATF4P18848 RNU6-1109P-201ENST00000391187 107 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RNU1-139P-201ENST00000391307 165 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.8□□□□□ -1.8
ATF4P18848 AC097463.2-201ENST00000421074 142 ntBASIC3.8□□□□□ -1.8
ATF4P18848 Z98742.2-201ENST00000431564 187 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RPS29P9-201ENST00000440360 171 ntBASIC3.8□□□□□ -1.8
ATF4P18848 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.8□□□□□ -1.8
ATF4P18848 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.8□□□□□ -1.8
ATF4P18848 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RPS18P6-201ENST00000476880 458 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC010655.3-201ENST00000478818 450 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RAC1P5-201ENST00000512182 576 ntBASIC3.8□□□□□ -1.8
ATF4P18848 RNU6-1143P-201ENST00000516125 104 ntBASIC3.8□□□□□ -1.8
ATF4P18848 Y_RNA.713-201ENST00000517013 96 ntBASIC3.8□□□□□ -1.8
ATF4P18848 Y_RNA.719-201ENST00000517156 106 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC034114.1-201ENST00000520293 285 ntBASIC3.8□□□□□ -1.8
ATF4P18848 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
ATF4P18848 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.8□□□□□ -1.8
ATF4P18848 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.8□□□□□ -1.8
ATF4P18848 AL078605.1-201ENST00000603529 500 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AL121655.1-201ENST00000605811 308 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC012603.1-201ENST00000606424 528 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.8□□□□□ -1.8
ATF4P18848 AL138721.1-201ENST00000616756 179 ntBASIC3.8□□□□□ -1.8
ATF4P18848 AC091905.2-201ENST00000623143 306 ntBASIC3.8□□□□□ -1.8
ATF4P18848 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.8□□□□□ -1.8
ATF4P18848 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATF4P18848 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.8□□□□□ -1.8
ATF4P18848 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
ATF4P18848 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms