Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 7SK.13-201ENST00000622040 250 ntBASIC0.13□□□□□ -2.39
HMGA1P17096 FARSBP1-201ENST00000435808 1778 ntBASIC0.13□□□□□ -2.39
HMGA1P17096 MIR19B1-201ENST00000384829 87 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 LINC01347-201ENST00000417964 355 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 AC104651.1-201ENST00000427559 735 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HMGA1P17096 AC104073.1-201ENST00000451988 151 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 GTF2IP12-201ENST00000456547 356 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 AC084024.2-201ENST00000503480 791 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGA1P17096 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HMGA1P17096 AC124293.1-201ENST00000530034 493 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 AC124947.2-202ENST00000552735 133 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 Z83818.1-201ENST00000603584 150 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 AL139344.1-201ENST00000605228 195 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 AC106858.1-201ENST00000637497 429 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 Z75746.1-201ENST00000440243 2080 ntBASIC0.12□□□□□ -2.39
HMGA1P17096 MTND4P14-201ENST00000435799 1354 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 Y_RNA.30-201ENST00000362572 97 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 RNU5A-1-201ENST00000362698 116 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 MIR32-201ENST00000384965 70 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 RNU2-7P-201ENST00000410794 178 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGA1P17096 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.11□□□□□ -2.39
HMGA1P17096 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.11□□□□□ -2.39
HMGA1P17096 RPL23AP35-201ENST00000451906 501 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 RPL31P53-201ENST00000457065 348 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGA1P17096 AC068647.2-201ENST00000637380 353 ntBASIC0.11□□□□□ -2.39
HMGA1P17096 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 RNU1-58P-201ENST00000362413 163 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 SNORD82-201ENST00000365530 70 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 RNU6-45P-201ENST00000384471 107 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGA1P17096 AL590556.1-201ENST00000423231 483 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGA1P17096 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.1□□□□□ -2.39
HMGA1P17096 AC098831.1-201ENST00000440661 216 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 MEMO1P3-201ENST00000459811 302 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGA1P17096 RNU6-488P-201ENST00000515918 99 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 SNORD19.2-201ENST00000516978 73 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 AP003327.1-201ENST00000529684 127 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.1□□□□□ -2.39
HMGA1P17096 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGA1P17096 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.1□□□□□ -2.39
HMGA1P17096 AC007792.1-201ENST00000623023 402 ntBASIC0.1□□□□□ -2.39
HMGA1P17096 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGA1P17096 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGA1P17096 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.1□□□□□ -2.39
HMGA1P17096 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGA1P17096 AC245060.5-201ENST00000610778 3293 ntBASIC0.09□□□□□ -2.39
HMGA1P17096 Y_RNA.85-201ENST00000363014 111 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 RNU6-492P-201ENST00000363035 104 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC007919.1-201ENST00000429380 217 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 RPL36AP53-201ENST00000432891 316 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGA1P17096 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.09□□□□□ -2.4
HMGA1P17096 CYCTP-201ENST00000504253 315 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC108078.1-201ENST00000508073 725 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC118282.2-201ENST00000508739 374 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGA1P17096 HSPA8P13-201ENST00000523715 472 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AL512310.8-201ENST00000550183 120 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC090578.1-201ENST00000604955 591 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC090970.3-201ENST00000612566 866 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AL158163.2-201ENST00000619110 700 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 AC110491.1-201ENST00000562191 2010 ntBASIC0.09□□□□□ -2.4
HMGA1P17096 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HMGA1P17096 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.08□□□□□ -2.4
HMGA1P17096 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.08□□□□□ -2.4
HMGA1P17096 BPY2DP-201ENST00000422208 265 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 AC092423.1-201ENST00000430165 186 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 RPL26P6-201ENST00000440913 438 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 AC091435.1-201ENST00000505442 584 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 ARL2BPP5-201ENST00000523141 481 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGA1P17096 ADAM3B-201ENST00000569937 840 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 MIR3167-201ENST00000579623 85 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 MIR6134-201ENST00000617606 109 ntBASIC0.08□□□□□ -2.4
HMGA1P17096 RNA5SP257-201ENST00000363023 116 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 SNORD14D-201ENST00000384390 87 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 RPS3AP37-201ENST00000419176 745 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 RPEP5-201ENST00000441137 268 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGA1P17096 RPL7P43-201ENST00000478876 753 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 AC113420.1-201ENST00000507903 571 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
HMGA1P17096 SCARNA15.2-201ENST00000516409 127 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGA1P17096 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGA1P17096 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.07□□□□□ -2.4
HMGA1P17096 NDUFA8P1-201ENST00000605525 367 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 AC021851.1-201ENST00000608537 1082 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 AC067863.3-201ENST00000624172 122 ntBASIC0.07□□□□□ -2.4
HMGA1P17096 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.06□□□□□ -2.4
HMGA1P17096 RNU6-741P-201ENST00000383889 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms