Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNU6-1301P-201ENST00000362724 104 ntBASIC4.46□□□□□ -1.7
BMP3P12645 RNU6-22P-201ENST00000384355 107 ntBASIC4.46□□□□□ -1.7
BMP3P12645 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BMP3P12645 SNORA53-201ENST00000391141 249 ntBASIC4.46□□□□□ -1.7
BMP3P12645 RNU6-1135P-201ENST00000411083 103 ntBASIC4.46□□□□□ -1.7
BMP3P12645 AL139247.1-201ENST00000422768 325 ntBASIC4.46□□□□□ -1.7
BMP3P12645 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.46□□□□□ -1.7
BMP3P12645 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.46□□□□□ -1.7
BMP3P12645 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.46□□□□□ -1.7
BMP3P12645 snoU13.3-201ENST00000459441 104 ntBASIC4.46□□□□□ -1.7
BMP3P12645 RNA5SP164-201ENST00000516533 110 ntBASIC4.46□□□□□ -1.7
BMP3P12645 RNU6-143P-201ENST00000516942 93 ntBASIC4.46□□□□□ -1.7
BMP3P12645 HMGB1P14-201ENST00000557424 591 ntBASIC4.46□□□□□ -1.7
BMP3P12645 AC090617.3-201ENST00000573670 475 ntBASIC4.46□□□□□ -1.7
BMP3P12645 AL360181.4-201ENST00000621752 134 ntBASIC4.46□□□□□ -1.7
BMP3P12645 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.46□□□□□ -1.7
BMP3P12645 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.46□□□□□ -1.7
BMP3P12645 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.46□□□□□ -1.7
BMP3P12645 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.46□□□□□ -1.7
BMP3P12645 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BMP3P12645 AL451142.2-201ENST00000429076 2090 ntBASIC4.45□□□□□ -1.7
BMP3P12645 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.45□□□□□ -1.7
BMP3P12645 RNU5A-1-201ENST00000362698 116 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RPL21P40-201ENST00000428586 483 ntBASIC4.45□□□□□ -1.7
BMP3P12645 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.45□□□□□ -1.7
BMP3P12645 AC087477.1-201ENST00000465747 340 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RPS26P21-201ENST00000475397 348 ntBASIC4.45□□□□□ -1.7
BMP3P12645 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.45□□□□□ -1.7
BMP3P12645 AK3P2-201ENST00000507976 429 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RNU6-479P-201ENST00000516348 105 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RNU1-95P-201ENST00000516357 160 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RNU1-128P-201ENST00000516704 160 ntBASIC4.45□□□□□ -1.7
BMP3P12645 RNU2-31P-201ENST00000516954 155 ntBASIC4.45□□□□□ -1.7
BMP3P12645 AC069240.1-201ENST00000548774 375 ntBASIC4.45□□□□□ -1.7
BMP3P12645 AL161629.2-201ENST00000615347 275 ntBASIC4.45□□□□□ -1.7
BMP3P12645 MIR6075-201ENST00000620782 95 ntBASIC4.45□□□□□ -1.7
BMP3P12645 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
BMP3P12645 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.45□□□□□ -1.7
BMP3P12645 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BMP3P12645 NCAPGP1-201ENST00000505112 1814 ntBASIC4.44□□□□□ -1.7
BMP3P12645 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
BMP3P12645 MIR412-201ENST00000362142 91 ntBASIC4.44□□□□□ -1.7
BMP3P12645 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.44□□□□□ -1.7
BMP3P12645 Y_RNA.286-201ENST00000364813 102 ntBASIC4.44□□□□□ -1.7
BMP3P12645 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
BMP3P12645 RNA5SP44-201ENST00000410446 133 ntBASIC4.44□□□□□ -1.7
BMP3P12645 RNU6-1025P-201ENST00000410629 104 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AL513331.1-201ENST00000411908 397 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.44□□□□□ -1.7
BMP3P12645 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.44□□□□□ -1.7
BMP3P12645 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.44□□□□□ -1.7
BMP3P12645 CYP4F29P-201ENST00000420685 446 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AL158156.1-201ENST00000422509 473 ntBASIC4.44□□□□□ -1.7
BMP3P12645 RPS20P1-201ENST00000434853 354 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.44□□□□□ -1.7
BMP3P12645 UBE2CP3-201ENST00000502715 450 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AC084851.1-201ENST00000529105 249 ntBASIC4.44□□□□□ -1.7
BMP3P12645 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.44□□□□□ -1.7
BMP3P12645 AC027288.2-201ENST00000553028 243 ntBASIC4.44□□□□□ -1.7
BMP3P12645 MIR4716-201ENST00000579628 84 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AC005046.1-201ENST00000608515 625 ntBASIC4.44□□□□□ -1.7
BMP3P12645 AC107294.1-201ENST00000609524 467 ntBASIC4.44□□□□□ -1.7
BMP3P12645 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BMP3P12645 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.44□□□□□ -1.7
BMP3P12645 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
BMP3P12645 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BMP3P12645 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
BMP3P12645 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BMP3P12645 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BMP3P12645 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.43□□□□□ -1.7
BMP3P12645 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
BMP3P12645 RNU6-227P-201ENST00000362865 103 ntBASIC4.43□□□□□ -1.7
BMP3P12645 Y_RNA.123-201ENST00000363338 102 ntBASIC4.43□□□□□ -1.7
BMP3P12645 SNORD14B-201ENST00000364533 90 ntBASIC4.43□□□□□ -1.7
BMP3P12645 Y_RNA.275-201ENST00000364726 110 ntBASIC4.43□□□□□ -1.7
BMP3P12645 RPL21P17-201ENST00000397467 475 ntBASIC4.43□□□□□ -1.7
BMP3P12645 Y_RNA.590-201ENST00000410140 107 ntBASIC4.43□□□□□ -1.7
BMP3P12645 RNU2-61P-201ENST00000411069 191 ntBASIC4.43□□□□□ -1.7
BMP3P12645 Y_RNA.623-201ENST00000411128 95 ntBASIC4.43□□□□□ -1.7
BMP3P12645 BMS1P22-201ENST00000414726 313 ntBASIC4.43□□□□□ -1.7
BMP3P12645 MTATP6P4-201ENST00000427725 675 ntBASIC4.43□□□□□ -1.7
BMP3P12645 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.43□□□□□ -1.7
BMP3P12645 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.43□□□□□ -1.7
BMP3P12645 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.43□□□□□ -1.7
BMP3P12645 MIR5187-201ENST00000583479 76 ntBASIC4.43□□□□□ -1.7
BMP3P12645 SNORA51-201ENST00000606420 132 ntBASIC4.43□□□□□ -1.7
BMP3P12645 SNORD113-5-201ENST00000607261 78 ntBASIC4.43□□□□□ -1.7
BMP3P12645 AL353748.2-201ENST00000622148 471 ntBASIC4.43□□□□□ -1.7
BMP3P12645 AC090617.7-201ENST00000623952 126 ntBASIC4.43□□□□□ -1.7
BMP3P12645 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms