Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC068276.1-201ENST00000605793 379 ntBASIC1.54□□□□□ -2.16
CD28P10747 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.54□□□□□ -2.16
CD28P10747 MIR5739-201ENST00000619803 80 ntBASIC1.54□□□□□ -2.16
CD28P10747 YWHAEP7-203ENST00000622054 312 ntBASIC1.54□□□□□ -2.16
CD28P10747 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CD28P10747 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CD28P10747 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CD28P10747 AC138393.1-203ENST00000327086 343 ntBASIC1.53□□□□□ -2.16
CD28P10747 Y_RNA.22-201ENST00000362492 102 ntBASIC1.53□□□□□ -2.16
CD28P10747 RNU6-1010P-201ENST00000362757 107 ntBASIC1.53□□□□□ -2.16
CD28P10747 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
CD28P10747 SNORD14B-201ENST00000364533 90 ntBASIC1.53□□□□□ -2.16
CD28P10747 RNU5E-5P-201ENST00000365379 116 ntBASIC1.53□□□□□ -2.16
CD28P10747 RNU6-39P-201ENST00000384344 107 ntBASIC1.53□□□□□ -2.16
CD28P10747 MTCYBP36-201ENST00000404146 440 ntBASIC1.53□□□□□ -2.16
CD28P10747 MIR1302-8-201ENST00000408342 128 ntBASIC1.53□□□□□ -2.16
CD28P10747 RNU2-63P-201ENST00000410792 194 ntBASIC1.53□□□□□ -2.16
CD28P10747 Y_RNA.623-201ENST00000411128 95 ntBASIC1.53□□□□□ -2.16
CD28P10747 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.53□□□□□ -2.16
CD28P10747 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AC016831.2-201ENST00000417179 352 ntBASIC1.53□□□□□ -2.16
CD28P10747 AL365338.1-201ENST00000422282 858 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC011233.1-201ENST00000422812 283 ntBASIC1.53□□□□□ -2.16
CD28P10747 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AL589872.1-201ENST00000426602 288 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AL627311.1-201ENST00000431514 115 ntBASIC1.53□□□□□ -2.16
CD28P10747 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 RPS24P1-201ENST00000438550 371 ntBASIC1.53□□□□□ -2.16
CD28P10747 GPM6BP3-201ENST00000442797 145 ntBASIC1.53□□□□□ -2.16
CD28P10747 TAF9P1-201ENST00000445421 515 ntBASIC1.53□□□□□ -2.16
CD28P10747 RPL7P12-201ENST00000446719 750 ntBASIC1.53□□□□□ -2.16
CD28P10747 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 TAF9P2-201ENST00000454958 515 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC112771.1-201ENST00000463581 102 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC090515.1-201ENST00000465295 476 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 MED28P2-201ENST00000475771 317 ntBASIC1.53□□□□□ -2.16
CD28P10747 RNU7-193P-201ENST00000516723 65 ntBASIC1.53□□□□□ -2.16
CD28P10747 SNORA31.25-201ENST00000517242 134 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC109329.1-201ENST00000518744 317 ntBASIC1.53□□□□□ -2.16
CD28P10747 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.53□□□□□ -2.16
CD28P10747 AL359851.1-201ENST00000569460 4997 ntBASIC1.53□□□□□ -2.16
CD28P10747 MIR5002-201ENST00000584713 97 ntBASIC1.53□□□□□ -2.16
CD28P10747 HMGN1P30-201ENST00000589286 268 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC009314.1-201ENST00000603871 304 ntBASIC1.53□□□□□ -2.16
CD28P10747 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC091304.9-201ENST00000612091 226 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC012409.4-201ENST00000612923 249 ntBASIC1.53□□□□□ -2.16
CD28P10747 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.53□□□□□ -2.16
CD28P10747 AC023510.2-201ENST00000622162 746 ntBASIC1.53□□□□□ -2.16
CD28P10747 AC092656.1-203ENST00000624134 423 ntBASIC1.53□□□□□ -2.16
CD28P10747 ZNF355P-201ENST00000427301 3216 ntBASIC1.52□□□□□ -2.17
CD28P10747 SNORD3E-201ENST00000362899 217 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNA5SP138-201ENST00000365098 114 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNA5SP240-201ENST00000365355 128 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNU6-843P-201ENST00000384454 104 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNA5SP213-201ENST00000391031 106 ntBASIC1.52□□□□□ -2.17
CD28P10747 RPL23AP32-201ENST00000395315 459 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC009518.2-201ENST00000418056 731 ntBASIC1.52□□□□□ -2.17
CD28P10747 AL160275.3-201ENST00000423876 471 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.52□□□□□ -2.17
CD28P10747 AL356583.2-201ENST00000426536 280 ntBASIC1.52□□□□□ -2.17
CD28P10747 RPL23AP7-203ENST00000449021 469 ntBASIC1.52□□□□□ -2.17
CD28P10747 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.52□□□□□ -2.17
CD28P10747 ZNF114P1-201ENST00000453500 292 ntBASIC1.52□□□□□ -2.17
CD28P10747 AL583843.1-201ENST00000456070 346 ntBASIC1.52□□□□□ -2.17
CD28P10747 CYP2C59P-201ENST00000457790 269 ntBASIC1.52□□□□□ -2.17
CD28P10747 CKS1BP2-201ENST00000497342 240 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.52□□□□□ -2.17
CD28P10747 AC112206.3-201ENST00000514578 389 ntBASIC1.52□□□□□ -2.17
CD28P10747 FABP5P5-201ENST00000515537 406 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNA5SP458-201ENST00000516188 119 ntBASIC1.52□□□□□ -2.17
CD28P10747 Y_RNA.672-201ENST00000516289 104 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
CD28P10747 CR383656.8-201ENST00000549046 145 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC092325.1-201ENST00000566449 554 ntBASIC1.52□□□□□ -2.17
CD28P10747 MIR5089-201ENST00000580047 84 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC090616.2-202ENST00000584248 222 ntBASIC1.52□□□□□ -2.17
CD28P10747 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.52□□□□□ -2.17
CD28P10747 AC025165.5-201ENST00000602802 578 ntBASIC1.52□□□□□ -2.17
CD28P10747 AL139286.2-201ENST00000606838 396 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC027807.2-201ENST00000616099 408 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC024940.5-201ENST00000622889 474 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC079248.2-201ENST00000623779 326 ntBASIC1.52□□□□□ -2.17
CD28P10747 AC017037.3-201ENST00000625016 472 ntBASIC1.52□□□□□ -2.17
CD28P10747 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
CD28P10747 RNA5SP160-201ENST00000364866 120 ntBASIC1.51□□□□□ -2.17
CD28P10747 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.51□□□□□ -2.17
CD28P10747 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CD28P10747 RNU6-72P-201ENST00000384285 79 ntBASIC1.51□□□□□ -2.17
CD28P10747 MIR17-201ENST00000385012 84 ntBASIC1.51□□□□□ -2.17
CD28P10747 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CD28P10747 SNORA46.1-201ENST00000391069 153 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms