Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNORA31.19-201ENST00000517079 126 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.78□□□□□ -2.28
CXCL1P09341 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.78□□□□□ -2.28
CXCL1P09341 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.78□□□□□ -2.28
CXCL1P09341 VN1R83P-201ENST00000595685 445 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 AL445435.1-201ENST00000604232 665 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.78□□□□□ -2.28
CXCL1P09341 AL355472.4-201ENST00000610233 626 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 AC009269.6-201ENST00000621778 588 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 AL356094.1-201ENST00000624663 1212 ntBASIC0.78□□□□□ -2.28
CXCL1P09341 ICE2P2-201ENST00000483823 2787 ntBASIC0.78□□□□□ -2.29
CXCL1P09341 RNU6-1284P-201ENST00000363701 100 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 RNU6-1210P-201ENST00000363775 107 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 RNU6-609P-201ENST00000365459 107 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 PIGPP2-201ENST00000411569 458 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL1P09341 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL1P09341 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CXCL1P09341 AC003071.1-201ENST00000451219 789 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL1P09341 RNU7-59P-201ENST00000459101 61 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.77□□□□□ -2.29
CXCL1P09341 AC108078.1-201ENST00000508073 725 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.77□□□□□ -2.29
CXCL1P09341 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL1P09341 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL1P09341 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.77□□□□□ -2.29
CXCL1P09341 BNIP3P9-201ENST00000603714 553 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 AP000860.1-201ENST00000605250 559 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 SNORD114-21-201ENST00000606412 72 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 AC231657.1-201ENST00000624313 397 ntBASIC0.77□□□□□ -2.29
CXCL1P09341 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CXCL1P09341 RNA5SP327-201ENST00000362494 101 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RNA5SP126-201ENST00000365092 109 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 SNORA29-201ENST00000384183 140 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RNU6-14P-201ENST00000384630 106 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RNU6-817P-201ENST00000391083 104 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 EIF1P1-201ENST00000421436 341 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL1P09341 MTCO3P43-201ENST00000440974 771 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 MTND2P4-201ENST00000445034 1004 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 GDI2P2-201ENST00000445131 608 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AL513124.1-201ENST00000450410 614 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.76□□□□□ -2.29
CXCL1P09341 RN7SKP210-201ENST00000459176 261 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RPL30P6-201ENST00000475925 342 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.76□□□□□ -2.29
CXCL1P09341 AL133373.1-201ENST00000497098 94 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL1P09341 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL1P09341 HMGN1P13-201ENST00000505795 138 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC079140.2-201ENST00000506193 142 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RNU6-548P-201ENST00000517083 115 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RNA5SP404-201ENST00000517118 132 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.76□□□□□ -2.29
CXCL1P09341 AC090115.3-201ENST00000553218 849 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 RPS3AP4-201ENST00000555161 764 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL1P09341 MIR5708-201ENST00000579723 85 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC060771.1-201ENST00000582031 164 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 VN1R87P-201ENST00000596706 487 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC013412.1-201ENST00000610687 192 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC012676.2-201ENST00000619258 186 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC123767.1-202ENST00000620407 817 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 AC092656.1-203ENST00000624134 423 ntBASIC0.76□□□□□ -2.29
CXCL1P09341 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CXCL1P09341 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU1-22P-201ENST00000363334 158 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 Y_RNA.255-201ENST00000364581 97 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 U8.10-201ENST00000384260 133 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU6-622P-201ENST00000384272 103 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU6-166P-201ENST00000384371 107 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU6-296P-201ENST00000384608 107 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU6-1222P-201ENST00000384615 107 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 MIR1289-2-201ENST00000408360 111 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AL589872.1-201ENST00000426602 288 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AL592045.1-201ENST00000429867 352 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 C8orf59P1-201ENST00000429930 303 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 CBX3P6-201ENST00000430257 527 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 FTH1P12-201ENST00000432137 551 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.75□□□□□ -2.29
CXCL1P09341 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.75□□□□□ -2.29
CXCL1P09341 AC009474.2-201ENST00000451383 136 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 TPRKBP1-201ENST00000456243 481 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 RNU6-333P-201ENST00000459117 107 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.75□□□□□ -2.29
CXCL1P09341 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.75□□□□□ -2.29
CXCL1P09341 AC021451.1-201ENST00000523498 1129 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 DEFB131D-201ENST00000526803 184 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AC087441.2-201ENST00000529141 262 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 MIR4293-201ENST00000584305 78 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 NIFKP6-201ENST00000598115 845 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AC092140.2-201ENST00000618027 521 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AL353770.2-201ENST00000620024 78 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 MIR8063-201ENST00000621930 81 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 AC068205.3-201ENST00000636385 468 ntBASIC0.75□□□□□ -2.29
CXCL1P09341 DDX43P2-201ENST00000604753 1354 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms