Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 AC092628.2-201ENST00000622492 339 ntBASIC4.74□□□□□ -1.65
NEFMP07197 AL031601.2-202ENST00000622650 282 ntBASIC4.74□□□□□ -1.65
NEFMP07197 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NEFMP07197 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEFMP07197 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NEFMP07197 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEFMP07197 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.73□□□□□ -1.65
NEFMP07197 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
NEFMP07197 AL365440.1-201ENST00000436135 2167 ntBASIC4.73□□□□□ -1.65
NEFMP07197 RNU6-790P-201ENST00000384479 105 ntBASIC4.73□□□□□ -1.65
NEFMP07197 RNA5SP171-201ENST00000391071 115 ntBASIC4.73□□□□□ -1.65
NEFMP07197 BX842559.1-201ENST00000419615 532 ntBASIC4.73□□□□□ -1.65
NEFMP07197 MTND2P29-201ENST00000438595 412 ntBASIC4.73□□□□□ -1.65
NEFMP07197 PRDX3P3-201ENST00000447765 522 ntBASIC4.73□□□□□ -1.65
NEFMP07197 AC034236.1-201ENST00000469891 373 ntBASIC4.73□□□□□ -1.65
NEFMP07197 RPS4XP13-201ENST00000483219 789 ntBASIC4.73□□□□□ -1.65
NEFMP07197 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.73□□□□□ -1.65
NEFMP07197 ACA59.1-201ENST00000515966 143 ntBASIC4.73□□□□□ -1.65
NEFMP07197 RNU6-1023P-201ENST00000516137 106 ntBASIC4.73□□□□□ -1.65
NEFMP07197 RNU2-27P-201ENST00000516185 142 ntBASIC4.73□□□□□ -1.65
NEFMP07197 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.73□□□□□ -1.65
NEFMP07197 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.73□□□□□ -1.65
NEFMP07197 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.73□□□□□ -1.65
NEFMP07197 MIR4444-1-201ENST00000581696 74 ntBASIC4.73□□□□□ -1.65
NEFMP07197 MIR4444-2-201ENST00000584390 74 ntBASIC4.73□□□□□ -1.65
NEFMP07197 OR1M4P-201ENST00000589199 287 ntBASIC4.73□□□□□ -1.65
NEFMP07197 AC019176.2-201ENST00000611579 315 ntBASIC4.73□□□□□ -1.65
NEFMP07197 AL355810.1-201ENST00000614629 552 ntBASIC4.73□□□□□ -1.65
NEFMP07197 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.73□□□□□ -1.65
NEFMP07197 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEFMP07197 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEFMP07197 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEFMP07197 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEFMP07197 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.72□□□□□ -1.65
NEFMP07197 RNA5SP295-201ENST00000362655 121 ntBASIC4.72□□□□□ -1.65
NEFMP07197 RNU6-263P-201ENST00000363811 107 ntBASIC4.72□□□□□ -1.65
NEFMP07197 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.72□□□□□ -1.65
NEFMP07197 AL445529.1-201ENST00000398713 389 ntBASIC4.72□□□□□ -1.65
NEFMP07197 AL030996.1-201ENST00000411430 235 ntBASIC4.72□□□□□ -1.65
NEFMP07197 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.72□□□□□ -1.65
NEFMP07197 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.72□□□□□ -1.65
NEFMP07197 AL353997.1-201ENST00000432936 108 ntBASIC4.72□□□□□ -1.65
NEFMP07197 RPS3AP12-201ENST00000443616 753 ntBASIC4.72□□□□□ -1.65
NEFMP07197 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEFMP07197 CHEK2P4-201ENST00000450340 246 ntBASIC4.72□□□□□ -1.65
NEFMP07197 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.72□□□□□ -1.65
NEFMP07197 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEFMP07197 Y_RNA.680-201ENST00000516441 93 ntBASIC4.72□□□□□ -1.65
NEFMP07197 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.72□□□□□ -1.65
NEFMP07197 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.72□□□□□ -1.65
NEFMP07197 MIR4738-201ENST00000579134 87 ntBASIC4.72□□□□□ -1.65
NEFMP07197 LRRC37A5P-203ENST00000580181 585 ntBASIC4.72□□□□□ -1.65
NEFMP07197 VN1R91P-201ENST00000594377 169 ntBASIC4.72□□□□□ -1.65
NEFMP07197 AC012669.1-201ENST00000603209 283 ntBASIC4.72□□□□□ -1.65
NEFMP07197 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
NEFMP07197 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.72□□□□□ -1.65
NEFMP07197 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEFMP07197 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
NEFMP07197 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEFMP07197 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NEFMP07197 Y_RNA.14-201ENST00000362415 103 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RNA5SP119-201ENST00000362715 117 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RNY1P16-201ENST00000363063 111 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RNU4-50P-201ENST00000364361 141 ntBASIC4.71□□□□□ -1.66
NEFMP07197 SNORA20.1-201ENST00000364790 130 ntBASIC4.71□□□□□ -1.66
NEFMP07197 MIR625-201ENST00000385047 85 ntBASIC4.71□□□□□ -1.66
NEFMP07197 MT-TW-201ENST00000387382 68 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RNU4-78P-201ENST00000410940 126 ntBASIC4.71□□□□□ -1.66
NEFMP07197 EI24P1-201ENST00000416584 867 ntBASIC4.71□□□□□ -1.66
NEFMP07197 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.71□□□□□ -1.66
NEFMP07197 AL358232.1-201ENST00000448030 501 ntBASIC4.71□□□□□ -1.66
NEFMP07197 U3.44-201ENST00000458938 192 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RPL39P38-201ENST00000467018 153 ntBASIC4.71□□□□□ -1.66
NEFMP07197 SNORA25.11-201ENST00000515935 105 ntBASIC4.71□□□□□ -1.66
NEFMP07197 SNORA40.15-201ENST00000516884 107 ntBASIC4.71□□□□□ -1.66
NEFMP07197 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.71□□□□□ -1.66
NEFMP07197 HSPE1P20-201ENST00000538133 289 ntBASIC4.71□□□□□ -1.66
NEFMP07197 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.71□□□□□ -1.66
NEFMP07197 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.71□□□□□ -1.66
NEFMP07197 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.71□□□□□ -1.66
NEFMP07197 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.71□□□□□ -1.66
NEFMP07197 AC006600.1-201ENST00000572529 153 ntBASIC4.71□□□□□ -1.66
NEFMP07197 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.71□□□□□ -1.66
NEFMP07197 MIR3128-201ENST00000581957 66 ntBASIC4.71□□□□□ -1.66
NEFMP07197 MIR4273-201ENST00000582824 84 ntBASIC4.71□□□□□ -1.66
NEFMP07197 MIR548AC-201ENST00000585049 88 ntBASIC4.71□□□□□ -1.66
NEFMP07197 BDH2P1-201ENST00000602288 736 ntBASIC4.71□□□□□ -1.66
NEFMP07197 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.71□□□□□ -1.66
NEFMP07197 U73479.1-201ENST00000618062 168 ntBASIC4.71□□□□□ -1.66
NEFMP07197 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.71□□□□□ -1.66
NEFMP07197 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEFMP07197 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
NEFMP07197 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.71□□□□□ -1.66
NEFMP07197 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEFMP07197 Y_RNA.60-201ENST00000362831 98 ntBASIC4.7□□□□□ -1.66
NEFMP07197 Y_RNA.117-201ENST00000363294 101 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms