Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.69□□□□□ -2.14
CD74P04233 AC145350.1-201ENST00000567426 208 ntBASIC1.69□□□□□ -2.14
CD74P04233 MIR1273C-201ENST00000578669 77 ntBASIC1.69□□□□□ -2.14
CD74P04233 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.69□□□□□ -2.14
CD74P04233 AL603755.1-201ENST00000619504 163 ntBASIC1.69□□□□□ -2.14
CD74P04233 MIR5739-201ENST00000619803 80 ntBASIC1.69□□□□□ -2.14
CD74P04233 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.69□□□□□ -2.14
CD74P04233 AC024940.5-201ENST00000622889 474 ntBASIC1.69□□□□□ -2.14
CD74P04233 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CD74P04233 AC244517.12-201ENST00000623581 663 ntBASIC1.69□□□□□ -2.14
CD74P04233 AC110994.2-201ENST00000635481 492 ntBASIC1.69□□□□□ -2.14
CD74P04233 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CD74P04233 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CD74P04233 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.68□□□□□ -2.14
CD74P04233 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CD74P04233 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CD74P04233 RNU6-1159P-201ENST00000362933 107 ntBASIC1.68□□□□□ -2.14
CD74P04233 U8.2-201ENST00000363156 134 ntBASIC1.68□□□□□ -2.14
CD74P04233 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CD74P04233 SNORA40C-201ENST00000391285 128 ntBASIC1.68□□□□□ -2.14
CD74P04233 CISD1P1-201ENST00000393907 327 ntBASIC1.68□□□□□ -2.14
CD74P04233 RPL23AP32-201ENST00000395315 459 ntBASIC1.68□□□□□ -2.14
CD74P04233 RPS3AP36-201ENST00000398190 775 ntBASIC1.68□□□□□ -2.14
CD74P04233 RNU2-39P-201ENST00000410604 198 ntBASIC1.68□□□□□ -2.14
CD74P04233 CYCSP46-201ENST00000423569 204 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.68□□□□□ -2.14
CD74P04233 ISCA1P6-201ENST00000427740 390 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC027124.2-201ENST00000428249 105 ntBASIC1.68□□□□□ -2.14
CD74P04233 RPL7P34-201ENST00000433316 712 ntBASIC1.68□□□□□ -2.14
CD74P04233 AL451074.3-201ENST00000437709 472 ntBASIC1.68□□□□□ -2.14
CD74P04233 RPS24P1-201ENST00000438550 371 ntBASIC1.68□□□□□ -2.14
CD74P04233 DNAJC19P4-201ENST00000440115 345 ntBASIC1.68□□□□□ -2.14
CD74P04233 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.68□□□□□ -2.14
CD74P04233 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.68□□□□□ -2.14
CD74P04233 AL583843.1-201ENST00000456070 346 ntBASIC1.68□□□□□ -2.14
CD74P04233 RPL23AP42-201ENST00000471152 471 ntBASIC1.68□□□□□ -2.14
CD74P04233 RAP1BP2-201ENST00000478270 544 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC023194.1-201ENST00000493084 308 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.68□□□□□ -2.14
CD74P04233 YWHAEP4-201ENST00000505390 198 ntBASIC1.68□□□□□ -2.14
CD74P04233 ANXA2P1-201ENST00000505539 926 ntBASIC1.68□□□□□ -2.14
CD74P04233 MTND4P2-201ENST00000507767 1203 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.68□□□□□ -2.14
CD74P04233 MTND1P22-201ENST00000510572 951 ntBASIC1.68□□□□□ -2.14
CD74P04233 ACA59.2-201ENST00000517061 156 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.68□□□□□ -2.14
CD74P04233 AC022616.3-201ENST00000523940 148 ntBASIC1.68□□□□□ -2.14
CD74P04233 FAM92A1P1-201ENST00000528023 890 ntBASIC1.68□□□□□ -2.14
CD74P04233 ADI1P3-201ENST00000549509 470 ntBASIC1.68□□□□□ -2.14
CD74P04233 MTND3P12-201ENST00000559068 328 ntBASIC1.68□□□□□ -2.14
CD74P04233 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.68□□□□□ -2.14
CD74P04233 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.68□□□□□ -2.14
CD74P04233 AC174048.1-201ENST00000603389 144 ntBASIC1.68□□□□□ -2.14
CD74P04233 AC091304.9-201ENST00000612091 226 ntBASIC1.68□□□□□ -2.14
CD74P04233 AL359547.2-201ENST00000615810 418 ntBASIC1.68□□□□□ -2.14
CD74P04233 MIR6715A-201ENST00000615929 79 ntBASIC1.68□□□□□ -2.14
CD74P04233 MIR6134-201ENST00000617606 109 ntBASIC1.68□□□□□ -2.14
CD74P04233 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.68□□□□□ -2.14
CD74P04233 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CD74P04233 AC092881.1-201ENST00000638218 2733 ntBASIC1.67□□□□□ -2.14
CD74P04233 AP000568.1-201ENST00000282964 442 ntBASIC1.67□□□□□ -2.14
CD74P04233 SNORA75B-201ENST00000384053 137 ntBASIC1.67□□□□□ -2.14
CD74P04233 RNU6-166P-201ENST00000384371 107 ntBASIC1.67□□□□□ -2.14
CD74P04233 SNORA24.1-201ENST00000384401 135 ntBASIC1.67□□□□□ -2.14
CD74P04233 SNORA40.3-201ENST00000390964 122 ntBASIC1.67□□□□□ -2.14
CD74P04233 SNORA26.8-201ENST00000391306 124 ntBASIC1.67□□□□□ -2.14
CD74P04233 AL033519.2-201ENST00000403958 392 ntBASIC1.67□□□□□ -2.14
CD74P04233 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.67□□□□□ -2.14
CD74P04233 MIR1302-8-201ENST00000408342 128 ntBASIC1.67□□□□□ -2.14
CD74P04233 RNA5SP111-201ENST00000411386 101 ntBASIC1.67□□□□□ -2.14
CD74P04233 RPS3AP3-201ENST00000411933 242 ntBASIC1.67□□□□□ -2.14
CD74P04233 AL139156.1-201ENST00000412785 841 ntBASIC1.67□□□□□ -2.14
CD74P04233 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.67□□□□□ -2.14
CD74P04233 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.67□□□□□ -2.14
CD74P04233 EDDM3CP-201ENST00000415977 425 ntBASIC1.67□□□□□ -2.14
CD74P04233 AC016831.2-201ENST00000417179 352 ntBASIC1.67□□□□□ -2.14
CD74P04233 AC009518.2-201ENST00000418056 731 ntBASIC1.67□□□□□ -2.14
CD74P04233 MTND6P13-201ENST00000443510 523 ntBASIC1.67□□□□□ -2.14
CD74P04233 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.67□□□□□ -2.14
CD74P04233 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.67□□□□□ -2.14
CD74P04233 snoU109.2-201ENST00000459316 135 ntBASIC1.67□□□□□ -2.14
CD74P04233 RBBP4P6-201ENST00000508098 202 ntBASIC1.67□□□□□ -2.14
CD74P04233 IGKV3-31-201ENST00000523109 329 ntBASIC1.67□□□□□ -2.14
CD74P04233 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.67□□□□□ -2.14
CD74P04233 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
CD74P04233 NIFKP6-201ENST00000598115 845 ntBASIC1.67□□□□□ -2.14
CD74P04233 AC012409.4-201ENST00000612923 249 ntBASIC1.67□□□□□ -2.14
CD74P04233 CDC27P3-201ENST00000635418 1910 ntBASIC1.67□□□□□ -2.14
CD74P04233 TEX21P-201ENST00000447107 1476 ntBASIC1.67□□□□□ -2.14
CD74P04233 MTND5P6-201ENST00000422338 1798 ntBASIC1.67□□□□□ -2.14
CD74P04233 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.66□□□□□ -2.14
CD74P04233 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CD74P04233 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.66□□□□□ -2.14
CD74P04233 RNU6-858P-201ENST00000362436 107 ntBASIC1.66□□□□□ -2.14
CD74P04233 SNORD3E-201ENST00000362899 217 ntBASIC1.66□□□□□ -2.14
CD74P04233 U8.3-201ENST00000363321 132 ntBASIC1.66□□□□□ -2.14
CD74P04233 RNU6-395P-201ENST00000365662 106 ntBASIC1.66□□□□□ -2.14
CD74P04233 MIR558-201ENST00000384920 94 ntBASIC1.66□□□□□ -2.14
CD74P04233 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms