Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.63□□□□□ -1.99
VTNP04004 AC000111.3-201ENST00000433478 193 ntBASIC2.63□□□□□ -1.99
VTNP04004 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.63□□□□□ -1.99
VTNP04004 RNU6-261P-201ENST00000459506 102 ntBASIC2.63□□□□□ -1.99
VTNP04004 TRBV1-201ENST00000476502 284 ntBASIC2.63□□□□□ -1.99
VTNP04004 RNU6-1315P-201ENST00000517187 99 ntBASIC2.63□□□□□ -1.99
VTNP04004 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.63□□□□□ -1.99
VTNP04004 HIF1AP1-201ENST00000553642 175 ntBASIC2.63□□□□□ -1.99
VTNP04004 AL157687.1-201ENST00000554853 619 ntBASIC2.63□□□□□ -1.99
VTNP04004 MTCO3P13-201ENST00000577757 781 ntBASIC2.63□□□□□ -1.99
VTNP04004 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.63□□□□□ -1.99
VTNP04004 AP000907.4-201ENST00000604143 237 ntBASIC2.63□□□□□ -1.99
VTNP04004 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.63□□□□□ -1.99
VTNP04004 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
VTNP04004 HSPA8P4-201ENST00000511877 1920 ntBASIC2.62□□□□□ -1.99
VTNP04004 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
VTNP04004 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
VTNP04004 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 Y_RNA.573-201ENST00000384763 105 ntBASIC2.62□□□□□ -1.99
VTNP04004 RNU6-1068P-201ENST00000410958 103 ntBASIC2.62□□□□□ -1.99
VTNP04004 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.62□□□□□ -1.99
VTNP04004 RPL21P90-201ENST00000415692 466 ntBASIC2.62□□□□□ -1.99
VTNP04004 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.62□□□□□ -1.99
VTNP04004 SEPT14P3-201ENST00000439401 183 ntBASIC2.62□□□□□ -1.99
VTNP04004 AL732372.2-207ENST00000445840 183 ntBASIC2.62□□□□□ -1.99
VTNP04004 WASF1P1-201ENST00000447560 1131 ntBASIC2.62□□□□□ -1.99
VTNP04004 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VTNP04004 SEPT14P2-201ENST00000453405 183 ntBASIC2.62□□□□□ -1.99
VTNP04004 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 RPS29P20-201ENST00000489592 171 ntBASIC2.62□□□□□ -1.99
VTNP04004 AC098591.2-201ENST00000510152 315 ntBASIC2.62□□□□□ -1.99
VTNP04004 AF213884.2-201ENST00000510417 903 ntBASIC2.62□□□□□ -1.99
VTNP04004 SEPT14P4-201ENST00000513445 186 ntBASIC2.62□□□□□ -1.99
VTNP04004 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 FO082796.1-201ENST00000523795 183 ntBASIC2.62□□□□□ -1.99
VTNP04004 AP005435.4-201ENST00000529514 284 ntBASIC2.62□□□□□ -1.99
VTNP04004 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.62□□□□□ -1.99
VTNP04004 BNIP3P6-201ENST00000549284 499 ntBASIC2.62□□□□□ -1.99
VTNP04004 MIR1273C-201ENST00000578669 77 ntBASIC2.62□□□□□ -1.99
VTNP04004 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.62□□□□□ -1.99
VTNP04004 AC008739.2-201ENST00000597006 317 ntBASIC2.62□□□□□ -1.99
VTNP04004 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
VTNP04004 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.62□□□□□ -1.99
VTNP04004 AC007014.2-201ENST00000615581 479 ntBASIC2.62□□□□□ -1.99
VTNP04004 uc_338.11-201ENST00000619132 160 ntBASIC2.62□□□□□ -1.99
VTNP04004 MIR3688-2-201ENST00000636963 87 ntBASIC2.62□□□□□ -1.99
VTNP04004 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.62□□□□□ -1.99
VTNP04004 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
VTNP04004 AL354685.2-201ENST00000448218 1447 ntBASIC2.61□□□□□ -1.99
VTNP04004 Y_RNA.33-201ENST00000362591 102 ntBASIC2.61□□□□□ -1.99
VTNP04004 Y_RNA.295-201ENST00000364918 102 ntBASIC2.61□□□□□ -1.99
VTNP04004 RNU6-877P-201ENST00000383868 107 ntBASIC2.61□□□□□ -1.99
VTNP04004 RNU6-1179P-201ENST00000384667 107 ntBASIC2.61□□□□□ -1.99
VTNP04004 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.61□□□□□ -1.99
VTNP04004 MIR888-201ENST00000401186 77 ntBASIC2.61□□□□□ -1.99
VTNP04004 RNU4-46P-201ENST00000410818 138 ntBASIC2.61□□□□□ -1.99
VTNP04004 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC007560.1-201ENST00000426912 237 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC009414.1-201ENST00000427200 443 ntBASIC2.61□□□□□ -1.99
VTNP04004 AL591704.1-201ENST00000432574 275 ntBASIC2.61□□□□□ -1.99
VTNP04004 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
VTNP04004 AL513124.1-201ENST00000450410 614 ntBASIC2.61□□□□□ -1.99
VTNP04004 SCARNA18-201ENST00000459004 134 ntBASIC2.61□□□□□ -1.99
VTNP04004 RPS27P26-201ENST00000494583 239 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.61□□□□□ -1.99
VTNP04004 AC114786.4-201ENST00000508771 728 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.61□□□□□ -1.99
VTNP04004 RNU6-835P-201ENST00000516974 104 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC025755.1-201ENST00000521306 278 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.61□□□□□ -1.99
VTNP04004 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
VTNP04004 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.61□□□□□ -1.99
VTNP04004 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.61□□□□□ -1.99
VTNP04004 AL157871.3-201ENST00000557231 293 ntBASIC2.61□□□□□ -1.99
VTNP04004 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.61□□□□□ -1.99
VTNP04004 MIR3124-201ENST00000582636 67 ntBASIC2.61□□□□□ -1.99
VTNP04004 MIR548AC-201ENST00000585049 88 ntBASIC2.61□□□□□ -1.99
VTNP04004 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.61□□□□□ -1.99
VTNP04004 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.61□□□□□ -1.99
VTNP04004 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VTNP04004 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VTNP04004 Y_RNA.256-201ENST00000364594 104 ntBASIC2.6□□□□□ -1.99
VTNP04004 RNU4-66P-201ENST00000365199 138 ntBASIC2.6□□□□□ -1.99
VTNP04004 RNU6-715P-201ENST00000365204 103 ntBASIC2.6□□□□□ -1.99
VTNP04004 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VTNP04004 RNU6-658P-201ENST00000384606 106 ntBASIC2.6□□□□□ -1.99
VTNP04004 SNORA41-201ENST00000384675 132 ntBASIC2.6□□□□□ -1.99
VTNP04004 MIR767-201ENST00000390228 109 ntBASIC2.6□□□□□ -1.99
VTNP04004 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VTNP04004 AL356057.2-201ENST00000403318 432 ntBASIC2.6□□□□□ -1.99
VTNP04004 CIR1P3-201ENST00000405137 479 ntBASIC2.6□□□□□ -1.99
VTNP04004 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
VTNP04004 MTCYBP5-201ENST00000423752 1135 ntBASIC2.6□□□□□ -1.99
VTNP04004 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.6□□□□□ -1.99
VTNP04004 AC003071.1-201ENST00000451219 789 ntBASIC2.6□□□□□ -1.99
VTNP04004 RPL26P9-201ENST00000457466 433 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms