Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.59□□□□□ -2.15
MT-ND4P03905 DNAJC19P4-201ENST00000440115 345 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 MTND5P2-201ENST00000442927 1142 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND4P03905 CYP2C59P-201ENST00000457790 269 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.59□□□□□ -2.15
MT-ND4P03905 snoU109.2-201ENST00000459316 135 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND4P03905 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND4P03905 PSMA3P-201ENST00000555485 635 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND4P03905 AC233702.2-202ENST00000562547 291 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND4P03905 MTCYBP33-201ENST00000575007 1130 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.59□□□□□ -2.15
MT-ND4P03905 HMGN1P30-201ENST00000589286 268 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AC243960.4-201ENST00000600532 288 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AC234772.3-201ENST00000602277 528 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.59□□□□□ -2.15
MT-ND4P03905 MIR7844-201ENST00000616161 122 ntBASIC1.59□□□□□ -2.15
MT-ND4P03905 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
MT-ND4P03905 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.59□□□□□ -2.16
MT-ND4P03905 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.59□□□□□ -2.16
MT-ND4P03905 MIR412-201ENST00000362142 91 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 RNU1-23P-201ENST00000363361 144 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 CISD1P1-201ENST00000393907 327 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 HMGN2P39-201ENST00000398005 273 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AL031779.1-201ENST00000415663 330 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND4P03905 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 MTCO2P29-201ENST00000465212 189 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC018868.1-201ENST00000491307 315 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC108078.2-201ENST00000510750 236 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC091965.2-201ENST00000512324 613 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
MT-ND4P03905 SNORA4.4-201ENST00000515921 135 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 RNU6-123P-201ENST00000516163 102 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 RN7SKP265-201ENST00000516448 223 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 HSPE1P18-201ENST00000517602 280 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
MT-ND4P03905 MIR4435-1-201ENST00000582552 80 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC010928.2-201ENST00000588017 287 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 BNIP3P30-201ENST00000601184 574 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC093788.1-201ENST00000609356 927 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC012409.4-201ENST00000612923 249 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AC009878.1-201ENST00000621819 340 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC017037.3-201ENST00000625016 472 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 AC099654.13-201ENST00000639774 207 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
MT-ND4P03905 AC092881.1-201ENST00000638218 2733 ntBASIC1.58□□□□□ -2.16
MT-ND4P03905 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORD114-19-201ENST00000363072 75 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORD14B-201ENST00000364533 90 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 RNU6-234P-201ENST00000365229 104 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 RNU5E-5P-201ENST00000365379 116 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORA25B-201ENST00000365507 128 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.57□□□□□ -2.16
MT-ND4P03905 RNU6-72P-201ENST00000384285 79 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORA24.1-201ENST00000384401 135 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 MRPL42P2-201ENST00000403169 426 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AL445685.2-201ENST00000422551 342 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.57□□□□□ -2.16
MT-ND4P03905 AL356583.2-201ENST00000426536 280 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC137499.1-201ENST00000427602 88 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AL627311.1-201ENST00000431514 115 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.57□□□□□ -2.16
MT-ND4P03905 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.57□□□□□ -2.16
MT-ND4P03905 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.57□□□□□ -2.16
MT-ND4P03905 UBE2DNL-203ENST00000474922 222 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 RPL38P4-201ENST00000502376 214 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.57□□□□□ -2.16
MT-ND4P03905 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.57□□□□□ -2.16
MT-ND4P03905 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORA3.4-201ENST00000515969 96 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 RNA5SP137-201ENST00000516833 135 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORA48.11-201ENST00000517015 89 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 SNORA31.23-201ENST00000517219 133 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC107953.1-201ENST00000522216 297 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.57□□□□□ -2.16
MT-ND4P03905 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.57□□□□□ -2.16
MT-ND4P03905 ADI1P3-201ENST00000549509 470 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.57□□□□□ -2.16
MT-ND4P03905 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.57□□□□□ -2.16
MT-ND4P03905 RPL30P11-203ENST00000598995 310 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.57□□□□□ -2.16
MT-ND4P03905 AC096772.1-201ENST00000609146 564 ntBASIC1.57□□□□□ -2.16
MT-ND4P03905 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MT-ND4P03905 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms