Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.19□□□□□ -2.22
COL4A1P02462 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A1P02462 AGGF1P5-201ENST00000567900 919 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC005951.2-201ENST00000576282 495 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC005261.5-201ENST00000596280 355 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 BNIP3P39-201ENST00000601077 554 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AP000403.1-201ENST00000603349 851 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL450336.1-201ENST00000605180 586 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC004805.2-201ENST00000605382 482 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A1P02462 AC007038.2-201ENST00000608095 740 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC239868.4-201ENST00000608318 671 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC004908.2-201ENST00000609090 574 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A1P02462 AC079395.3-201ENST00000615161 484 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC013470.4-201ENST00000619978 986 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL031667.3-201ENST00000620124 655 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A1P02462 OR4G3P-201ENST00000633500 913 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A1P02462 U2.21-201ENST00000637295 81 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 AP003399.1-201ENST00000637534 361 ntBASIC1.19□□□□□ -2.22
COL4A1P02462 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL4A1P02462 RNU6-884P-201ENST00000363889 107 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 Y_RNA.234-201ENST00000364409 97 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 SNORA23-201ENST00000365128 182 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 RNU6-997P-201ENST00000384725 107 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 RNU6-1328P-201ENST00000410938 106 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC023141.4-201ENST00000412031 328 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A1P02462 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A1P02462 AL445305.1-201ENST00000432577 575 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 MTND1P32-201ENST00000433043 938 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A1P02462 Z82210.1-201ENST00000440037 231 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC005094.1-201ENST00000440420 368 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A1P02462 ANKRD26P4-201ENST00000455755 950 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC104563.1-201ENST00000476147 376 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL4A1P02462 AC093809.1-201ENST00000509155 340 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 MTND2P32-201ENST00000521584 1038 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A1P02462 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.18□□□□□ -2.22
COL4A1P02462 ELOCP32-201ENST00000548625 324 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A1P02462 DUXAP1-201ENST00000556632 463 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL391261.3-201ENST00000557194 520 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL133153.1-201ENST00000557756 303 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 SUB1P4-201ENST00000566062 339 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC136618.2-201ENST00000575091 400 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A1P02462 VN1R82P-201ENST00000601481 356 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL596327.1-201ENST00000603629 213 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC027807.2-201ENST00000616099 408 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AC092140.2-201ENST00000618027 521 ntBASIC1.18□□□□□ -2.22
COL4A1P02462 AL137003.2-201ENST00000606924 2538 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 RNU6-621P-201ENST00000364752 109 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 RNU6-157P-201ENST00000383957 107 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
COL4A1P02462 SNORD56-201ENST00000413522 71 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A1P02462 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A1P02462 TXNL1P1-201ENST00000429528 554 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A1P02462 AL117351.1-201ENST00000438864 766 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AL606662.1-201ENST00000445763 553 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A1P02462 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A1P02462 AC114786.4-201ENST00000508771 728 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC010587.2-201ENST00000511727 448 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC114797.1-201ENST00000514003 728 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC110760.3-202ENST00000515177 371 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC090888.2-201ENST00000559765 1144 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 MIR4287-201ENST00000579398 78 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AL391001.1-201ENST00000602747 715 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC025588.2-201ENST00000604851 466 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC013244.3-201ENST00000605614 388 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC092953.2-201ENST00000608000 699 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC096772.1-201ENST00000609146 564 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.17□□□□□ -2.22
COL4A1P02462 MIR7515-201ENST00000637837 67 ntBASIC1.17□□□□□ -2.22
COL4A1P02462 SNORA4.1-201ENST00000364263 144 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 RNU6-741P-201ENST00000383889 107 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 RPS24P7-201ENST00000416921 246 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 XKRYP1-201ENST00000423438 492 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 ZNF863P-201ENST00000426746 417 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 AC007919.1-201ENST00000429380 217 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 AC244035.1-201ENST00000430042 390 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 MICF-203ENST00000432679 129 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 XKRYP2-201ENST00000432915 492 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 RPL37P21-201ENST00000435890 276 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 SNRPEP9-201ENST00000436794 238 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 MTND4P27-201ENST00000450813 1354 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A1P02462 MRPS36P2-201ENST00000512569 299 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 SCARNA3-201ENST00000517097 143 ntBASIC1.16□□□□□ -2.22
COL4A1P02462 RNA5SP291-201ENST00000517222 105 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms