Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC098848.2-201ENST00000588023 330 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AL138889.2-201ENST00000603883 242 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 SEPT7P9-203ENST00000604116 343 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC103810.6-201ENST00000606708 136 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 MIR6132-201ENST00000622083 109 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQA1P01909 FARSBP1-201ENST00000435808 1778 ntBASIC1.62□□□□□ -2.15
HLA-DQA1P01909 CENPCP1-201ENST00000533085 2578 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 RBBP8P1-201ENST00000449447 1844 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC138393.1-203ENST00000327086 343 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 FGF7P2-201ENST00000332473 296 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 RNA5SP68-201ENST00000363885 119 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 RNU6-74P-201ENST00000384235 107 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 SNORA67.4-201ENST00000384688 142 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 RNU6-248P-201ENST00000410720 107 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 MTND3P17-201ENST00000416968 344 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 MTCYBP5-201ENST00000423752 1135 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 EIF4EP4-201ENST00000424916 578 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 MTCO3P5-201ENST00000433620 714 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 NDUFB1P2-201ENST00000449477 176 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC108938.1-201ENST00000451204 136 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 MED28P2-201ENST00000475771 317 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 BET1P1-201ENST00000482276 359 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC018437.1-201ENST00000492214 406 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC234781.5-201ENST00000508429 271 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC104806.1-201ENST00000508720 308 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 Y_RNA.687-201ENST00000516558 91 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 SNORA18.6-201ENST00000516792 115 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 RPL7P20-201ENST00000520308 745 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 OR5AL2P-201ENST00000532185 920 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 Z94722.1-201ENST00000604328 474 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC064872.1-201ENST00000604823 1072 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 MIR98-201ENST00000606724 119 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AL449363.1-201ENST00000617815 186 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC011155.2-201ENST00000623202 216 ntBASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQA1P01909 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 Y_RNA.367-201ENST00000365544 101 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 RNU6-116P-201ENST00000384042 109 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 MIR1-2-201ENST00000384961 85 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 SNORA46.1-201ENST00000391069 153 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 SNORD23.1-201ENST00000408212 104 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AIMP1P2-201ENST00000425294 312 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 MTND2P4-201ENST00000445034 1004 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 MTND3P25-201ENST00000509243 135 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 CR383656.8-201ENST00000549046 145 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 MIR3913-1-201ENST00000577744 102 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC006023.1-201ENST00000603944 259 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 Z84480.1-201ENST00000605131 311 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 RNU6-91P-201ENST00000607774 107 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AC093788.1-201ENST00000609356 927 ntBASIC1.6□□□□□ -2.15
HLA-DQA1P01909 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HLA-DQA1P01909 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC006020.1-201ENST00000420179 1854 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 SNORA62.1-201ENST00000364287 154 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 SNORA16B-201ENST00000364674 135 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RNU1-91P-201ENST00000364746 163 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RNU6-282P-201ENST00000365357 103 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RNU6-843P-201ENST00000384454 104 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 RNU1-148P-201ENST00000384472 162 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 MIR518C-201ENST00000384822 101 ntBASIC1.59□□□□□ -2.15
HLA-DQA1P01909 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQA1P01909 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms