Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 Y_RNA.296-201ENST00000364930 108 ntBASIC2.52□□□□□ -2.01
SIX3O95343 Y_RNA.799-201ENST00000364992 102 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RNU6-1042P-201ENST00000384204 107 ntBASIC2.52□□□□□ -2.01
SIX3O95343 SNORD116-2-201ENST00000384274 95 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RNU6-348P-201ENST00000384386 107 ntBASIC2.52□□□□□ -2.01
SIX3O95343 SNORD116-20-201ENST00000384529 92 ntBASIC2.52□□□□□ -2.01
SIX3O95343 SNORD116-6-201ENST00000384711 96 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AL360182.1-201ENST00000397433 468 ntBASIC2.52□□□□□ -2.01
SIX3O95343 EEF1A1P40-201ENST00000412883 573 ntBASIC2.52□□□□□ -2.01
SIX3O95343 UBE2V1P10-201ENST00000414685 269 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AL353621.1-201ENST00000418219 243 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
SIX3O95343 MTCYBP5-201ENST00000423752 1135 ntBASIC2.52□□□□□ -2.01
SIX3O95343 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
SIX3O95343 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX3O95343 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.52□□□□□ -2.01
SIX3O95343 AC000111.3-201ENST00000433478 193 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AL596276.1-201ENST00000434465 418 ntBASIC2.52□□□□□ -2.01
SIX3O95343 HMGB1P31-201ENST00000437242 427 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX3O95343 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RPS3AP17-201ENST00000472594 777 ntBASIC2.52□□□□□ -2.01
SIX3O95343 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RNU5B-3P-201ENST00000516601 115 ntBASIC2.52□□□□□ -2.01
SIX3O95343 MTCO2P4-201ENST00000517968 247 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AP003072.2-201ENST00000527756 676 ntBASIC2.52□□□□□ -2.01
SIX3O95343 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.52□□□□□ -2.01
SIX3O95343 AC135279.1-201ENST00000543493 504 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AP002770.2-201ENST00000543613 532 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.52□□□□□ -2.01
SIX3O95343 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
SIX3O95343 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
SIX3O95343 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC110760.3-201ENST00000598794 467 ntBASIC2.52□□□□□ -2.01
SIX3O95343 RNU6-91P-201ENST00000607774 107 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
SIX3O95343 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC091834.1-201ENST00000614543 472 ntBASIC2.52□□□□□ -2.01
SIX3O95343 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.52□□□□□ -2.01
SIX3O95343 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SIX3O95343 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX3O95343 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
SIX3O95343 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SIX3O95343 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SIX3O95343 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
SIX3O95343 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX3O95343 SNORD116-9-201ENST00000384000 95 ntBASIC2.51□□□□□ -2.01
SIX3O95343 SNORD116-3-201ENST00000384287 95 ntBASIC2.51□□□□□ -2.01
SIX3O95343 SNORD116-7-201ENST00000384404 95 ntBASIC2.51□□□□□ -2.01
SIX3O95343 SNORD116-5-201ENST00000384462 95 ntBASIC2.51□□□□□ -2.01
SIX3O95343 RNU6-45P-201ENST00000384471 107 ntBASIC2.51□□□□□ -2.01
SIX3O95343 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
SIX3O95343 CIR1P3-201ENST00000405137 479 ntBASIC2.51□□□□□ -2.01
SIX3O95343 RNU4-46P-201ENST00000410818 138 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX3O95343 EIF4EP4-201ENST00000424916 578 ntBASIC2.51□□□□□ -2.01
SIX3O95343 MTCO1P19-201ENST00000443487 500 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AL360221.1-201ENST00000445989 335 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX3O95343 AL360271.2-201ENST00000447710 161 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
SIX3O95343 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.51□□□□□ -2.01
SIX3O95343 AC074344.1-201ENST00000512823 224 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AC104136.1-201ENST00000512969 394 ntBASIC2.51□□□□□ -2.01
SIX3O95343 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX3O95343 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AL512310.1-201ENST00000548639 172 ntBASIC2.51□□□□□ -2.01
SIX3O95343 MIR4775-201ENST00000581168 75 ntBASIC2.51□□□□□ -2.01
SIX3O95343 RPS15AP11-201ENST00000594193 385 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
SIX3O95343 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.51□□□□□ -2.01
SIX3O95343 uc_338.11-201ENST00000619132 160 ntBASIC2.51□□□□□ -2.01
SIX3O95343 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AC099842.1-201ENST00000619919 596 ntBASIC2.51□□□□□ -2.01
SIX3O95343 AC138627.2-201ENST00000624202 601 ntBASIC2.51□□□□□ -2.01
SIX3O95343 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX3O95343 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SIX3O95343 RBBP8P1-201ENST00000449447 1844 ntBASIC2.51□□□□□ -2.01
SIX3O95343 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SIX3O95343 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.51□□□□□ -2.01
SIX3O95343 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SIX3O95343 RNU6-371P-201ENST00000364283 108 ntBASIC2.5□□□□□ -2.01
SIX3O95343 RNA5SP125-201ENST00000364843 120 ntBASIC2.5□□□□□ -2.01
SIX3O95343 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.5□□□□□ -2.01
SIX3O95343 AC073464.1-201ENST00000429823 534 ntBASIC2.5□□□□□ -2.01
SIX3O95343 CALM1P1-201ENST00000442082 433 ntBASIC2.5□□□□□ -2.01
SIX3O95343 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.5□□□□□ -2.01
SIX3O95343 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX3O95343 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX3O95343 MTND3P25-201ENST00000509243 135 ntBASIC2.5□□□□□ -2.01
SIX3O95343 SNORD27.1-201ENST00000516319 72 ntBASIC2.5□□□□□ -2.01
SIX3O95343 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
SIX3O95343 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SIX3O95343 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.5□□□□□ -2.01
SIX3O95343 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX3O95343 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
SIX3O95343 MTCYBP33-201ENST00000575007 1130 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms