Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC-0.03□□□□□ -2.41
USH2AO75445 AC025627.3-201ENST00000582078 182 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC099842.1-201ENST00000619919 596 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC-0.03□□□□□ -2.41
USH2AO75445 AL138713.1-201ENST00000624026 2130 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 ENSAP3-201ENST00000312710 333 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU1-105P-201ENST00000363470 161 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNY4P28-201ENST00000365281 93 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 MTND1P16-201ENST00000465177 898 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AP002004.2-201ENST00000531656 154 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 MRPS36P4-201ENST00000534436 298 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 AC004584.2-201ENST00000570407 410 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC-0.03□□□□□ -2.41
USH2AO75445 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.03□□□□□ -2.41
USH2AO75445 AL161423.1-201ENST00000613700 262 ntBASIC-0.03□□□□□ -2.41
USH2AO75445 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.04□□□□□ -2.42
USH2AO75445 AL049874.1-201ENST00000489560 388 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNA5SP227-201ENST00000516184 113 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 AP004371.1-201ENST00000525240 214 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 AL138478.1-201ENST00000612252 832 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.04□□□□□ -2.42
USH2AO75445 RNU4-16P-201ENST00000364737 141 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC022022.1-201ENST00000430304 178 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RPL26P26-201ENST00000480251 434 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 AP003122.4-201ENST00000530980 758 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.04□□□□□ -2.42
USH2AO75445 AC091805.2-201ENST00000603848 235 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC018462.2-201ENST00000605375 395 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC021506.2-201ENST00000612354 169 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 SNORD33-201ENST00000362761 85 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 ZNF863P-201ENST00000426746 417 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 RPL17P35-201ENST00000432217 549 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.04□□□□□ -2.42
USH2AO75445 AC091021.1-201ENST00000468051 388 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC108740.1-201ENST00000498629 225 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC-0.04□□□□□ -2.42
USH2AO75445 AC011260.1-201ENST00000578420 472 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AL357312.1-201ENST00000603879 298 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNU6-24P-201ENST00000384440 107 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 MTCO1P20-201ENST00000425366 358 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 PGBD4P5-201ENST00000445958 426 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RPL18AP17-201ENST00000455326 198 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNU6-197P-201ENST00000516680 100 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNA5SP165-201ENST00000517142 115 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNU2-19P-201ENST00000517288 84 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC-0.04□□□□□ -2.42
USH2AO75445 AC010186.2-204ENST00000537668 439 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AC027288.2-201ENST00000553028 243 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 AP000676.3-201ENST00000623299 569 ntBASIC-0.04□□□□□ -2.42
USH2AO75445 RNU6-600P-201ENST00000362524 99 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 EIF4EP2-201ENST00000422816 654 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC-0.05□□□□□ -2.42
USH2AO75445 MTCO3P18-201ENST00000440206 761 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 AL096803.2-201ENST00000450032 677 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AP001324.2-201ENST00000461163 319 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC105029.1-201ENST00000520250 669 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 AC090330.1-201ENST00000588646 764 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 AC092354.1-201ENST00000606057 376 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6V-201ENST00000384105 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL049545.1-201ENST00000401856 572 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.05□□□□□ -2.42
USH2AO75445 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USH2AO75445 RNVU1-2-201ENST00000516326 135 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC005832.3-201ENST00000537929 631 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 AL590282.1-201ENST00000610379 1136 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL590410.1-201ENST00000617925 333 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6-25P-201ENST00000383873 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6-29P-201ENST00000384637 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 MIR607-201ENST00000385241 96 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 SNORD89-201ENST00000390981 114 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC-0.05□□□□□ -2.42
USH2AO75445 AL354941.1-201ENST00000438600 464 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 MTCO1P44-201ENST00000441935 243 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 MTCYBP16-201ENST00000509187 1129 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6-27P-201ENST00000516146 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC096656.1-201ENST00000623826 1364 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USH2AO75445 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6-1155P-201ENST00000363554 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 RNU6-546P-201ENST00000383991 107 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms