Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MIR764-201ENST00000390811 85 ntBASIC2.26□□□□□ -2.05
SDC3O75056 MIR1302-8-201ENST00000408342 128 ntBASIC2.26□□□□□ -2.05
SDC3O75056 U6atac.2-201ENST00000408644 118 ntBASIC2.26□□□□□ -2.05
SDC3O75056 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.26□□□□□ -2.05
SDC3O75056 BX295541.1-201ENST00000417774 250 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.26□□□□□ -2.05
SDC3O75056 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.26□□□□□ -2.05
SDC3O75056 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC079448.1-201ENST00000449377 373 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.26□□□□□ -2.05
SDC3O75056 RPL36AP48-201ENST00000485521 314 ntBASIC2.26□□□□□ -2.05
SDC3O75056 FAM92A1P2-202ENST00000504766 877 ntBASIC2.26□□□□□ -2.05
SDC3O75056 RBBP4P6-201ENST00000508098 202 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC3O75056 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC3O75056 MTCO2P4-201ENST00000517968 247 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.26□□□□□ -2.05
SDC3O75056 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.26□□□□□ -2.05
SDC3O75056 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC3O75056 MIR4528-201ENST00000577763 90 ntBASIC2.26□□□□□ -2.05
SDC3O75056 MIR548AC-201ENST00000585049 88 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC010620.1-201ENST00000601088 1102 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AL138889.2-201ENST00000603883 242 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
SDC3O75056 AC006566.1-201ENST00000608943 513 ntBASIC2.26□□□□□ -2.05
SDC3O75056 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.26□□□□□ -2.05
SDC3O75056 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.26□□□□□ -2.05
SDC3O75056 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
SDC3O75056 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.26□□□□□ -2.05
SDC3O75056 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SDC3O75056 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
SDC3O75056 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SDC3O75056 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDC3O75056 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 Y_RNA.553-201ENST00000384670 102 ntBASIC2.25□□□□□ -2.05
SDC3O75056 Y_RNA.576-201ENST00000384781 102 ntBASIC2.25□□□□□ -2.05
SDC3O75056 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 RN7SKP32-201ENST00000410167 303 ntBASIC2.25□□□□□ -2.05
SDC3O75056 Y_RNA.623-201ENST00000411128 95 ntBASIC2.25□□□□□ -2.05
SDC3O75056 EEF1A1P40-201ENST00000412883 573 ntBASIC2.25□□□□□ -2.05
SDC3O75056 Z82209.1-201ENST00000422141 2135 ntBASIC2.25□□□□□ -2.05
SDC3O75056 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 TOMM20P4-201ENST00000427861 435 ntBASIC2.25□□□□□ -2.05
SDC3O75056 HMGN2P3-201ENST00000433603 273 ntBASIC2.25□□□□□ -2.05
SDC3O75056 MTCO3P5-201ENST00000433620 714 ntBASIC2.25□□□□□ -2.05
SDC3O75056 HMGN2P5-201ENST00000436882 273 ntBASIC2.25□□□□□ -2.05
SDC3O75056 RPS12P2-201ENST00000439728 269 ntBASIC2.25□□□□□ -2.05
SDC3O75056 RPS15AP9-201ENST00000439856 381 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.25□□□□□ -2.05
SDC3O75056 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 DYNLL1P5-201ENST00000467158 270 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AC112206.3-201ENST00000514578 389 ntBASIC2.25□□□□□ -2.05
SDC3O75056 MIR892C-201ENST00000516410 77 ntBASIC2.25□□□□□ -2.05
SDC3O75056 ACA59.2-201ENST00000517061 156 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.25□□□□□ -2.05
SDC3O75056 AP005902.1-201ENST00000521358 186 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC3O75056 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
SDC3O75056 MIR3913-1-201ENST00000577744 102 ntBASIC2.25□□□□□ -2.05
SDC3O75056 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.25□□□□□ -2.05
SDC3O75056 AC068790.2-201ENST00000602601 557 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AL645944.1-201ENST00000603857 493 ntBASIC2.25□□□□□ -2.05
SDC3O75056 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDC3O75056 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.24□□□□□ -2.05
SDC3O75056 AC016717.2-201ENST00000609089 5141 ntBASIC2.24□□□□□ -2.05
SDC3O75056 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
SDC3O75056 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.24□□□□□ -2.05
SDC3O75056 RNU6-371P-201ENST00000364283 108 ntBASIC2.24□□□□□ -2.05
SDC3O75056 RNU6-282P-201ENST00000365357 103 ntBASIC2.24□□□□□ -2.05
SDC3O75056 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
SDC3O75056 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.24□□□□□ -2.05
SDC3O75056 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
SDC3O75056 AC097463.2-201ENST00000421074 142 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AL365338.1-201ENST00000422282 858 ntBASIC2.24□□□□□ -2.05
SDC3O75056 EIF4EP4-201ENST00000424916 578 ntBASIC2.24□□□□□ -2.05
SDC3O75056 RPS3AP44-201ENST00000425466 790 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.24□□□□□ -2.05
SDC3O75056 AL627311.1-201ENST00000431514 115 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AL591806.2-201ENST00000433122 173 ntBASIC2.24□□□□□ -2.05
SDC3O75056 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AL583843.1-201ENST00000456070 346 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.24□□□□□ -2.05
SDC3O75056 AC022364.2-201ENST00000457963 554 ntBASIC2.24□□□□□ -2.05
SDC3O75056 MTND4P2-201ENST00000507767 1203 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.24□□□□□ -2.05
SDC3O75056 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.24□□□□□ -2.05
SDC3O75056 AC117532.1-201ENST00000514638 323 ntBASIC2.24□□□□□ -2.05
SDC3O75056 RNU6-430P-201ENST00000517078 107 ntBASIC2.24□□□□□ -2.05
SDC3O75056 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
SDC3O75056 OR5AQ1P-201ENST00000527596 927 ntBASIC2.24□□□□□ -2.05
SDC3O75056 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms