Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
PLOD3O60568 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
PLOD3O60568 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PLOD3O60568 RNU6-525P-201ENST00000363685 104 ntBASIC2.58□□□□□ -2
PLOD3O60568 Y_RNA.324-201ENST00000365165 102 ntBASIC2.58□□□□□ -2
PLOD3O60568 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
PLOD3O60568 RNU6-434P-201ENST00000384376 107 ntBASIC2.58□□□□□ -2
PLOD3O60568 RNU6-393P-201ENST00000384475 107 ntBASIC2.58□□□□□ -2
PLOD3O60568 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.58□□□□□ -2
PLOD3O60568 RNU2-3P-201ENST00000410144 191 ntBASIC2.58□□□□□ -2
PLOD3O60568 RNU2-29P-201ENST00000410423 189 ntBASIC2.58□□□□□ -2
PLOD3O60568 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.58□□□□□ -2
PLOD3O60568 AIMP1P2-201ENST00000425294 312 ntBASIC2.58□□□□□ -2
PLOD3O60568 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.58□□□□□ -2
PLOD3O60568 MTCO2P11-201ENST00000431069 680 ntBASIC2.58□□□□□ -2
PLOD3O60568 MTND4P32-201ENST00000437189 1237 ntBASIC2.58□□□□□ -2
PLOD3O60568 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
PLOD3O60568 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.58□□□□□ -2
PLOD3O60568 MTCO3P7-201ENST00000510008 774 ntBASIC2.58□□□□□ -2
PLOD3O60568 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
PLOD3O60568 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.58□□□□□ -2
PLOD3O60568 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
PLOD3O60568 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
PLOD3O60568 NDUFA8P1-201ENST00000605525 367 ntBASIC2.58□□□□□ -2
PLOD3O60568 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.58□□□□□ -2
PLOD3O60568 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.58□□□□□ -2
PLOD3O60568 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PLOD3O60568 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
PLOD3O60568 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.57□□□□□ -2
PLOD3O60568 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
PLOD3O60568 Y_RNA.77-201ENST00000362962 107 ntBASIC2.57□□□□□ -2
PLOD3O60568 RNU6-1210P-201ENST00000363775 107 ntBASIC2.57□□□□□ -2
PLOD3O60568 RNU6-1032P-201ENST00000384100 107 ntBASIC2.57□□□□□ -2
PLOD3O60568 RNU6-348P-201ENST00000384386 107 ntBASIC2.57□□□□□ -2
PLOD3O60568 MIR128-1-201ENST00000384921 82 ntBASIC2.57□□□□□ -2
PLOD3O60568 SNORA48.2-201ENST00000390926 124 ntBASIC2.57□□□□□ -2
PLOD3O60568 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
PLOD3O60568 BTF3L4P1-201ENST00000413813 468 ntBASIC2.57□□□□□ -2
PLOD3O60568 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.57□□□□□ -2
PLOD3O60568 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 RPL30P12-201ENST00000474666 353 ntBASIC2.57□□□□□ -2
PLOD3O60568 MTCYBP40-201ENST00000509390 1135 ntBASIC2.57□□□□□ -2
PLOD3O60568 RN7SKP298-201ENST00000515950 94 ntBASIC2.57□□□□□ -2
PLOD3O60568 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 AL356057.1-201ENST00000533798 831 ntBASIC2.57□□□□□ -2
PLOD3O60568 IMMP1LP2-201ENST00000552954 492 ntBASIC2.57□□□□□ -2
PLOD3O60568 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.57□□□□□ -2
PLOD3O60568 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 AC093249.1-201ENST00000567049 203 ntBASIC2.57□□□□□ -2
PLOD3O60568 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.57□□□□□ -2
PLOD3O60568 AC005046.1-201ENST00000608515 625 ntBASIC2.57□□□□□ -2
PLOD3O60568 AC012640.5-201ENST00000623897 319 ntBASIC2.57□□□□□ -2
PLOD3O60568 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PLOD3O60568 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PLOD3O60568 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
PLOD3O60568 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.56□□□□□ -2
PLOD3O60568 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.56□□□□□ -2
PLOD3O60568 Y_RNA.480-201ENST00000384364 102 ntBASIC2.56□□□□□ -2
PLOD3O60568 AL138827.1-201ENST00000402666 306 ntBASIC2.56□□□□□ -2
PLOD3O60568 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
PLOD3O60568 AF274854.1-201ENST00000413236 615 ntBASIC2.56□□□□□ -2
PLOD3O60568 CYCSP33-201ENST00000414485 327 ntBASIC2.56□□□□□ -2
PLOD3O60568 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.56□□□□□ -2
PLOD3O60568 MTATP6P18-201ENST00000417994 673 ntBASIC2.56□□□□□ -2
PLOD3O60568 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.56□□□□□ -2
PLOD3O60568 MTATP6P26-201ENST00000445926 662 ntBASIC2.56□□□□□ -2
PLOD3O60568 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.56□□□□□ -2
PLOD3O60568 RPL31P3-201ENST00000458430 332 ntBASIC2.56□□□□□ -2
PLOD3O60568 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.56□□□□□ -2
PLOD3O60568 MTCO3P9-201ENST00000506989 781 ntBASIC2.56□□□□□ -2
PLOD3O60568 RNU7-193P-201ENST00000516723 65 ntBASIC2.56□□□□□ -2
PLOD3O60568 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.56□□□□□ -2
PLOD3O60568 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.56□□□□□ -2
PLOD3O60568 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.56□□□□□ -2
PLOD3O60568 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.56□□□□□ -2
PLOD3O60568 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.56□□□□□ -2
PLOD3O60568 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
PLOD3O60568 AC110760.3-201ENST00000598794 467 ntBASIC2.56□□□□□ -2
PLOD3O60568 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PLOD3O60568 AC091834.1-201ENST00000614543 472 ntBASIC2.56□□□□□ -2
PLOD3O60568 Z69720.2-201ENST00000624755 279 ntBASIC2.56□□□□□ -2
PLOD3O60568 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.56□□□□□ -2
PLOD3O60568 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.56□□□□□ -2
PLOD3O60568 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
PLOD3O60568 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
PLOD3O60568 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
PLOD3O60568 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
PLOD3O60568 SNORD70.1-201ENST00000391007 85 ntBASIC2.55□□□□□ -2
PLOD3O60568 CBX3P9-201ENST00000402326 552 ntBASIC2.55□□□□□ -2
PLOD3O60568 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
PLOD3O60568 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.55□□□□□ -2
PLOD3O60568 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
PLOD3O60568 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
PLOD3O60568 PRPS1P1-201ENST00000445305 876 ntBASIC2.55□□□□□ -2
PLOD3O60568 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.55□□□□□ -2
PLOD3O60568 SNRPFP3-201ENST00000457792 225 ntBASIC2.55□□□□□ -2
PLOD3O60568 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms