Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 VN1R82P-201ENST00000601481 356 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC012065.4-201ENST00000602445 679 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC025811.1-201ENST00000604312 472 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC010900.2-201ENST00000604508 210 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC112220.3-201ENST00000605502 502 ntBASIC1.38□□□□□ -2.19
SGCEO43556 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC006386.1-201ENST00000619436 415 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.38□□□□□ -2.19
SGCEO43556 RNU6-1210P-201ENST00000363775 107 ntBASIC1.37□□□□□ -2.19
SGCEO43556 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.37□□□□□ -2.19
SGCEO43556 RNU6-338P-201ENST00000383888 105 ntBASIC1.37□□□□□ -2.19
SGCEO43556 CBX3P9-201ENST00000402326 552 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AL136310.1-201ENST00000404926 654 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC016831.2-201ENST00000417179 352 ntBASIC1.37□□□□□ -2.19
SGCEO43556 CYCSP49-201ENST00000420810 319 ntBASIC1.37□□□□□ -2.19
SGCEO43556 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.37□□□□□ -2.19
SGCEO43556 AL117351.1-201ENST00000438864 766 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AL606517.1-201ENST00000446914 387 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC093899.1-201ENST00000457984 376 ntBASIC1.37□□□□□ -2.19
SGCEO43556 HMGB1P30-201ENST00000492455 606 ntBASIC1.37□□□□□ -2.19
SGCEO43556 TPT1P8-201ENST00000510120 555 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC010587.2-201ENST00000511727 448 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.37□□□□□ -2.19
SGCEO43556 AC018630.3-201ENST00000542637 96 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC136618.2-201ENST00000575091 400 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC012360.2-201ENST00000609349 391 ntBASIC1.37□□□□□ -2.19
SGCEO43556 AC004908.3-201ENST00000610248 625 ntBASIC1.37□□□□□ -2.19
SGCEO43556 uc_338.5-201ENST00000611839 155 ntBASIC1.37□□□□□ -2.19
SGCEO43556 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.37□□□□□ -2.19
SGCEO43556 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.37□□□□□ -2.19
SGCEO43556 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SGCEO43556 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
SGCEO43556 CBX3P1-201ENST00000325243 554 ntBASIC1.36□□□□□ -2.19
SGCEO43556 RNA5SP190-201ENST00000365222 118 ntBASIC1.36□□□□□ -2.19
SGCEO43556 RNU6-723P-201ENST00000383973 107 ntBASIC1.36□□□□□ -2.19
SGCEO43556 RNU6-769P-201ENST00000384407 104 ntBASIC1.36□□□□□ -2.19
SGCEO43556 MIR29B2-201ENST00000385055 81 ntBASIC1.36□□□□□ -2.19
SGCEO43556 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SGCEO43556 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SGCEO43556 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 AL365338.1-201ENST00000422282 858 ntBASIC1.36□□□□□ -2.19
SGCEO43556 MTCO3P46-201ENST00000425787 232 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 LARP1BP3-201ENST00000437229 869 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.36□□□□□ -2.19
SGCEO43556 AL358794.1-201ENST00000445689 381 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.36□□□□□ -2.19
SGCEO43556 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.36□□□□□ -2.19
SGCEO43556 AL121594.1-201ENST00000475906 575 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 RNU6-548P-201ENST00000517083 115 ntBASIC1.36□□□□□ -2.19
SGCEO43556 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.36□□□□□ -2.19
SGCEO43556 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 ARL2BPP2-201ENST00000550907 489 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.36□□□□□ -2.19
SGCEO43556 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.36□□□□□ -2.19
SGCEO43556 WISP1-OT1-201ENST00000602893 642 ntBASIC1.36□□□□□ -2.19
SGCEO43556 Z82243.1-201ENST00000609432 473 ntBASIC1.36□□□□□ -2.19
SGCEO43556 AC233981.2-201ENST00000611524 1614 ntBASIC1.36□□□□□ -2.19
SGCEO43556 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SGCEO43556 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
SGCEO43556 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SGCEO43556 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SGCEO43556 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
SGCEO43556 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
SGCEO43556 RNY4P24-201ENST00000362735 96 ntBASIC1.35□□□□□ -2.19
SGCEO43556 SMIM11P1-201ENST00000369586 178 ntBASIC1.35□□□□□ -2.19
SGCEO43556 BTF3L4P2-201ENST00000392798 346 ntBASIC1.35□□□□□ -2.19
SGCEO43556 MTATP6P20-201ENST00000414147 562 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.35□□□□□ -2.19
SGCEO43556 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.35□□□□□ -2.19
SGCEO43556 PTENP1-201ENST00000447117 1215 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.35□□□□□ -2.19
SGCEO43556 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.35□□□□□ -2.19
SGCEO43556 SNORA19.3-201ENST00000516165 130 ntBASIC1.35□□□□□ -2.19
SGCEO43556 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.35□□□□□ -2.19
SGCEO43556 AP004607.1-201ENST00000524456 203 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.35□□□□□ -2.19
SGCEO43556 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SGCEO43556 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AC025678.1-201ENST00000567861 338 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.35□□□□□ -2.19
SGCEO43556 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
SGCEO43556 MIR544B-201ENST00000582372 78 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AC009269.6-201ENST00000621778 588 ntBASIC1.35□□□□□ -2.19
SGCEO43556 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.35□□□□□ -2.19
SGCEO43556 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
SGCEO43556 RNU6-942P-201ENST00000363002 107 ntBASIC1.34□□□□□ -2.19
SGCEO43556 Y_RNA.99-201ENST00000363138 105 ntBASIC1.34□□□□□ -2.19
SGCEO43556 RNU6-622P-201ENST00000384272 103 ntBASIC1.34□□□□□ -2.19
SGCEO43556 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
SGCEO43556 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
SGCEO43556 RNA5SP390-201ENST00000410191 113 ntBASIC1.34□□□□□ -2.19
SGCEO43556 RNU2-23P-201ENST00000410545 195 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms