Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FRG2DP-202ENST00000566967 323 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.34□□□□□ -1.87
PHGDHO43175 AC010653.1-201ENST00000571108 881 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.34□□□□□ -1.87
PHGDHO43175 AL356055.1-201ENST00000602528 446 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AL355877.2-201ENST00000603670 358 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AL161423.1-201ENST00000613700 262 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.88
PHGDHO43175 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.88
PHGDHO43175 AC010889.1-201ENST00000566193 2666 ntBASIC3.34□□□□□ -1.88
PHGDHO43175 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.88
PHGDHO43175 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.88
PHGDHO43175 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHGDHO43175 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHGDHO43175 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-593P-201ENST00000364716 112 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-336P-201ENST00000364891 107 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 SNORA62.3-201ENST00000365110 153 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 Y_RNA.482-201ENST00000384377 111 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-1297P-201ENST00000384415 104 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 MIR517A-201ENST00000385001 87 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-750P-201ENST00000390946 107 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-370P-201ENST00000411008 104 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-1304P-201ENST00000411374 106 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC245054.2-201ENST00000415639 319 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.33□□□□□ -1.88
PHGDHO43175 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.33□□□□□ -1.88
PHGDHO43175 AL591043.1-201ENST00000432461 424 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 U8.21-201ENST00000459536 136 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-1016P-201ENST00000516689 94 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 RNU6-1153P-201ENST00000516760 105 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC023632.4-201ENST00000517783 191 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PHGDHO43175 AC009163.5-201ENST00000575421 637 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.33□□□□□ -1.88
PHGDHO43175 AC006130.2-201ENST00000586202 326 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC124303.1-201ENST00000605703 360 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 AC019193.3-201ENST00000609144 554 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHGDHO43175 MTND4P23-201ENST00000447723 1363 ntBASIC3.33□□□□□ -1.88
PHGDHO43175 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHGDHO43175 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
PHGDHO43175 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHGDHO43175 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHGDHO43175 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PHGDHO43175 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHGDHO43175 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 RNU6-799P-201ENST00000363567 107 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 RNU6-105P-201ENST00000363909 104 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 RNU6-1317P-201ENST00000364582 104 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 RNU6-790P-201ENST00000384479 105 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 MIR134-201ENST00000385258 73 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PHGDHO43175 AC096649.2-201ENST00000416186 393 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 MTND1P14-201ENST00000427400 950 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC097713.2-201ENST00000430199 356 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.32□□□□□ -1.88
PHGDHO43175 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.32□□□□□ -1.88
PHGDHO43175 AL513043.1-201ENST00000439124 535 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC124916.1-201ENST00000444020 547 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 PCMTD1P1-201ENST00000455560 355 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.32□□□□□ -1.88
PHGDHO43175 RPL9P9-202ENST00000466501 579 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 MED28P2-201ENST00000475771 317 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 RPS27P26-201ENST00000494583 239 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.32□□□□□ -1.88
PHGDHO43175 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.32□□□□□ -1.88
PHGDHO43175 CR383656.8-201ENST00000549046 145 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.32□□□□□ -1.88
PHGDHO43175 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
PHGDHO43175 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.32□□□□□ -1.88
PHGDHO43175 AL050343.2-201ENST00000607338 280 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AL442067.2-201ENST00000614033 363 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC097372.5-201ENST00000623665 376 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC090617.7-201ENST00000623952 126 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 AC009093.8-201ENST00000641769 292 ntBASIC3.32□□□□□ -1.88
PHGDHO43175 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHGDHO43175 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PHGDHO43175 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PHGDHO43175 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PHGDHO43175 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 MIR200C-201ENST00000384980 68 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.31□□□□□ -1.88
PHGDHO43175 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.31□□□□□ -1.88
PHGDHO43175 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC006946.1-201ENST00000429106 328 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms