Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORD116.3-201ENST00000517176 78 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AC090115.3-201ENST00000553218 849 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN1O15353 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN1O15353 AC008521.1-201ENST00000587471 187 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 AL590808.1-201ENST00000618696 141 ntBASIC3.8□□□□□ -1.8
FOXN1O15353 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN1O15353 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN1O15353 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN1O15353 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN1O15353 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN1O15353 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
FOXN1O15353 RNU1-115P-201ENST00000365329 160 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU6-823P-201ENST00000391042 103 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU6-101P-201ENST00000410323 104 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXN1O15353 RPL7P37-201ENST00000425095 738 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RPL21P40-201ENST00000428586 483 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 AC005094.1-201ENST00000440420 368 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXN1O15353 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.79□□□□□ -1.8
FOXN1O15353 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN1O15353 RN7SL442P-201ENST00000473804 320 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNY3P15-201ENST00000516297 97 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 SCARNA16.2-201ENST00000516520 172 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU6-1069P-201ENST00000516612 133 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNA5SP384-201ENST00000516615 116 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU6-1332P-201ENST00000516666 104 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 RNU1-54P-201ENST00000517181 120 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXN1O15353 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN1O15353 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 AC016727.2-201ENST00000603988 621 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 uc_338.32-201ENST00000615087 172 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN1O15353 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN1O15353 AL359893.1-201ENST00000447628 1580 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
FOXN1O15353 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXN1O15353 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN1O15353 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN1O15353 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
FOXN1O15353 AC000403.1-201ENST00000613696 3585 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN1O15353 RNU1-70P-201ENST00000362618 164 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 RNU6-266P-201ENST00000364225 107 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN1O15353 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN1O15353 SNORA16.2-201ENST00000390991 127 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 SNORD70.1-201ENST00000391007 85 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AL583834.1-201ENST00000406943 343 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 RNU2-64P-201ENST00000411315 191 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN1O15353 BMS1P22-201ENST00000414726 313 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 HMGB1P9-201ENST00000429856 646 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN1O15353 AC008264.1-201ENST00000447612 367 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN1O15353 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN1O15353 SNORD97-201ENST00000459187 142 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 RPL21P103-201ENST00000479921 488 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN1O15353 AC135721.1-201ENST00000497954 479 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 RNU6-408P-201ENST00000515910 100 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 Y_RNA.680-201ENST00000516441 93 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AC107934.2-201ENST00000518653 310 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN1O15353 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN1O15353 AC015712.3-201ENST00000559380 164 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN1O15353 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN1O15353 MIR3941-201ENST00000582572 103 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 UBL5P2-201ENST00000583788 219 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AC025588.3-201ENST00000604182 274 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 SNORD58B-201ENST00000607313 66 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 AL512643.1-201ENST00000635735 524 ntBASIC3.78□□□□□ -1.8
FOXN1O15353 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN1O15353 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
FOXN1O15353 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXN1O15353 RNU6-874P-201ENST00000362390 105 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 RNU6-1078P-201ENST00000364522 103 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 Y_RNA.552-201ENST00000384665 112 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 RNU6-387P-201ENST00000411331 105 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 AC243428.1-201ENST00000421099 264 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 RPL21P2-201ENST00000440049 481 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 DYNLT3P2-201ENST00000442517 295 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN1O15353 HMGB3P30-201ENST00000457863 606 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXN1O15353 SNORA14.1-201ENST00000516113 141 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 RNU4-77P-201ENST00000516692 156 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 RNU6-685P-201ENST00000517088 95 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 SCARNA20.6-201ENST00000517251 106 ntBASIC3.77□□□□□ -1.81
FOXN1O15353 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms