Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1AO00555 RNU6-798P-201ENST00000516912 103 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.29□□□□□ -2.36
CACNA1AO00555 HMGB1P14-201ENST00000557424 591 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC023158.1-201ENST00000561632 1025 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AP001269.3-201ENST00000588718 329 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AP001330.4-201ENST00000604350 154 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AL121992.2-201ENST00000606262 256 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC007349.4-201ENST00000608114 532 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AL590410.1-201ENST00000617925 333 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC097372.4-201ENST00000625025 466 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 MTND5P16-201ENST00000460269 1703 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 DSTNP4-201ENST00000399472 474 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 VN1R36P-201ENST00000414936 291 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC098614.2-201ENST00000426040 255 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 TAAR7P-201ENST00000436141 242 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1AO00555 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AC079140.2-201ENST00000506193 142 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1AO00555 RNU6-1095P-201ENST00000516148 108 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC006518.2-201ENST00000542513 940 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AC090888.1-201ENST00000561335 1141 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC005668.1-201ENST00000571142 476 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.29□□□□□ -2.36
CACNA1AO00555 AL138963.2-201ENST00000605137 226 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AL161423.1-201ENST00000613700 262 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 AP003072.5-201ENST00000623872 773 ntBASIC0.29□□□□□ -2.36
CACNA1AO00555 RNU4-23P-201ENST00000362839 140 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RNU6-1187P-201ENST00000364771 110 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 MT-TQ-201ENST00000387372 72 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 BTF3L4P2-201ENST00000392798 346 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AC013410.2-201ENST00000422627 201 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AL714022.1-201ENST00000439897 151 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 PRPS1P1-201ENST00000445305 876 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 TPTE2P6-202ENST00000445572 1007 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AC245102.2-201ENST00000448956 180 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC116337.2-201ENST00000477662 156 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RNA5SP112-201ENST00000515937 99 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 MIR892C-201ENST00000516410 77 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RNU6-1247P-201ENST00000516622 98 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC068276.1-201ENST00000605793 379 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RNU6-386P-201ENST00000362650 107 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 Y_RNA.67-201ENST00000362870 100 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RNU6-374P-201ENST00000364146 108 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 RPS15AP38-201ENST00000413110 372 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.28□□□□□ -2.36
CACNA1AO00555 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CACNA1AO00555 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.28□□□□□ -2.36
CACNA1AO00555 Z82210.1-201ENST00000440037 231 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.28□□□□□ -2.36
CACNA1AO00555 AC040168.1-201ENST00000623594 991 ntBASIC0.28□□□□□ -2.36
CACNA1AO00555 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.28□□□□□ -2.37
CACNA1AO00555 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CACNA1AO00555 RNU6-167P-201ENST00000384292 106 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 AL365496.1-201ENST00000426885 215 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 snoU13.9-201ENST00000458927 103 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AC092757.1-201ENST00000467293 467 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 SNORD116-30-201ENST00000516468 85 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 RNA5SP165-201ENST00000517142 115 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.27□□□□□ -2.37
CACNA1AO00555 AC125611.1-201ENST00000549563 229 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 AL592221.1-201ENST00000605266 382 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AL589743.7-201ENST00000612637 233 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.27□□□□□ -2.37
CACNA1AO00555 AC099654.5-201ENST00000636479 350 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CACNA1AO00555 SNORA40.19-201ENST00000390846 128 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 RPS24P7-201ENST00000416921 246 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 RPL26P26-201ENST00000480251 434 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AC008494.2-201ENST00000514544 370 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 SNORA4.4-201ENST00000515921 135 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1AO00555 AC007151.1-201ENST00000572774 483 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 MIR3198-2-201ENST00000577868 80 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 MIR4299-201ENST00000577899 72 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 RNU4-5P-201ENST00000607255 135 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 AL591926.4-201ENST00000616895 298 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms