Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP003122.5-201ENST00000527668 3766 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 RNA5SP139-201ENST00000364340 117 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 Y_RNA.414-201ENST00000384011 101 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 SNORD73A-201ENST00000386062 65 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 RNA5SP354-201ENST00000391247 136 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 RN7SKP32-201ENST00000410167 303 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 AC023141.4-201ENST00000412031 328 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXN3O00409 AC104332.2-201ENST00000429959 156 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 NDUFA5P4-201ENST00000436704 385 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 Z75741.1-201ENST00000446793 314 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 HMGN2P10-201ENST00000448085 265 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXN3O00409 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXN3O00409 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.42□□□□□ -1.86
FOXN3O00409 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXN3O00409 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXN3O00409 OR1M4P-201ENST00000589199 287 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 AL591516.1-201ENST00000611326 274 ntBASIC3.42□□□□□ -1.86
FOXN3O00409 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXN3O00409 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
FOXN3O00409 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXN3O00409 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXN3O00409 RNU6-72P-201ENST00000384285 79 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AL357075.1-201ENST00000404107 726 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AL354751.2-201ENST00000415471 210 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXN3O00409 HMGB1P18-201ENST00000438801 619 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 RPL23AP58-201ENST00000440453 469 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AC022634.1-201ENST00000520765 532 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXN3O00409 AC006199.1-201ENST00000548728 219 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXN3O00409 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXN3O00409 uc_338.25-201ENST00000613756 156 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 MIR7975-201ENST00000619350 68 ntBASIC3.41□□□□□ -1.86
FOXN3O00409 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
FOXN3O00409 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN3O00409 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN3O00409 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXN3O00409 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
FOXN3O00409 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
FOXN3O00409 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.4□□□□□ -1.86
FOXN3O00409 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXN3O00409 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 RNU6-254P-201ENST00000363377 107 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 Y_RNA.132-201ENST00000363421 102 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 U3.37-201ENST00000408528 213 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 SAR1AP4-201ENST00000429225 591 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 HIGD1AP2-201ENST00000446367 280 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXN3O00409 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXN3O00409 RNU7-66P-201ENST00000459469 62 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 RNU6-329P-201ENST00000459618 107 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXN3O00409 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXN3O00409 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXN3O00409 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN3O00409 RNU6-1069P-201ENST00000516612 133 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 RN7SKP256-201ENST00000517201 314 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AC104576.1-201ENST00000524225 88 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXN3O00409 MIR3942-201ENST00000585264 109 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN3O00409 AC064836.2-201ENST00000609491 462 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AC104237.2-201ENST00000612456 443 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 AL160413.1-201ENST00000622780 310 ntBASIC3.4□□□□□ -1.87
FOXN3O00409 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXN3O00409 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
FOXN3O00409 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXN3O00409 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXN3O00409 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
FOXN3O00409 Y_RNA.138-201ENST00000363462 102 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 RNU1-105P-201ENST00000363470 161 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 U3.6-201ENST00000363622 211 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.39□□□□□ -1.87
FOXN3O00409 MIR518D-201ENST00000385014 87 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXN3O00409 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXN3O00409 AL161651.1-201ENST00000440882 223 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXN3O00409 Y_RNA.632-201ENST00000459189 102 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 RNU7-138P-201ENST00000459479 64 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 HMGN1P10-201ENST00000474557 553 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 RPL7P43-201ENST00000478876 753 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXN3O00409 AC116655.1-201ENST00000508324 901 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.39□□□□□ -1.87
FOXN3O00409 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FOXN3O00409 AC087854.1-201ENST00000519706 414 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
FOXN3O00409 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms